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Name : pilB (BCO26_1870) Accession : YP_004569315.1 Strain : Bacillus coagulans 2-6 Genome accession: NC_015634 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1894984 - 1896645 bp Length : 1662 bp Strand : - Note : PFAM: GSPII_E; GSPII_E_N DNA sequence : ATGAAGCAAGTGCGAAAAAGGCTTGGCGATTTATTGGTGGATGCAGGATTAATTACAGCAGAACAGCTGGAACAGGTGCT GAAGGAAAAGGGGGCGGGCCAAAAACTGGGCGATGCGCTTCTTCAGCGTGGGCTGATTACCGAGCAGCAGCTCATTGAAG CGCTCGAATTCCAGCTCGGCATCCCGCACATCAGCCTTTTCCGCTATCCTTTTGACCAGAGCATCATGAATCTTGTGCCG AAAGAAATGGCGAAACGAAATCTTCTCATTCCGCTCAAAAAAGACGGGGATAAACTGTTTGTCGCAATGGCGGACCCGAT GGATTTTAATGCGATCGATGACTTGCGGCTATCGACCGGCTTCCGGATTGAACCGGCGATTGCCTCCAAAGACGATATTT TGCGGGCAATCCATAAGTATTACGACCTGGATGACAATATGGAAGAACTGCTGGACGGCATTGCTGAAAAGGAAGAGGCA ACCGAAACCGCACCCGGGGAAGAAGATTCGCCTGTTGTCCAGCTCGTCAACCAGATTTTGCAAAATGCCGTCCAAATGCG GGCAAGCGATATCCATCTGGACCCGCAGGAAACAAAGTTTATCGTCCGTTACCGGGTGGACGGAATTTTGCGGACGGAAC GGGTGCTGCCGAAATCGATGCAAAGCGTGCTTGTGGCGCGCATTAAAATTATGGCAAATCTAGATATTACCGAACACCGC ATCCCGCAGGACGGGCGTATTAAAATTGACGTCGATTTCCATCCCGTTGATATCCGGGTATCGACGTTGCCAACCGTATT CGGGGAAAAAATCGTGCTCCGGATTTTGGATCTGTCAACAGCCATCCACGATATCCGCCAGCTCGATTTTAACAAGCTGA ATCTCAAGCGTTTTACGCAGCTGATCCACCGCCCGAACGGCATCATTTTGATCACAGGGCCGACCGGTTCCGGGAAGTCA TCGACTTTATATGCGGCCCTAAACCATCTCAATGATGAACAGGTGAATATCATTACGGTGGAAGACCCGGTAGAGTACCA GATTGAAGGCGTCAACCAAATTCAGGTCAATCCGGCGGTCGGCATGACGTTCGGCAAAGGGCTGCGGGCGATTTTGCGGC AGGACCCGAATATTATCATGGTCGGGGAAATCCGGGACAAGGAAACGGCTGAAATTGCCATCCGCGCTTCCCTCACCGGC CATCTCGTCTTAAGTACGCTGCATACCAATGATGCGCTCGGCACAATTACAAGATTAATAGACATGGGCGTTGAGCCGTT TCTCGTTGCCACCTCACTCAGCGGTGTCGTGTCGCAGCGGCTCGTGCGCAAAGTGTGCCGCGACTGCGCAGAAGAACAGG TGCCGACAAAACGGGAAATAGAAATTTTTAAAAAACGCGGCATCAAAATTGAAAAAATTATCCGCGGCCGCGGATGCGGA AACTGCAACATGACCGGATACAAAGGGCGGATGGCGATCCAGGAACTGTTGATGATCAATGAAAACATCCGGCGCGGGAT TATGAACGGGGAACCTTTGTCCAAATTAAGGGAGTATGCAATCCAAAATAAAACGATTTTTCTGCTCGACGACGGATTAC TAAAGGTAAAGCAGGGGCTGACAACGACCGAAGAAGTGTTGCGCGTCGCCCTACCGGAGTAG Protein sequence : MKQVRKRLGDLLVDAGLITAEQLEQVLKEKGAGQKLGDALLQRGLITEQQLIEALEFQLGIPHISLFRYPFDQSIMNLVP KEMAKRNLLIPLKKDGDKLFVAMADPMDFNAIDDLRLSTGFRIEPAIASKDDILRAIHKYYDLDDNMEELLDGIAEKEEA TETAPGEEDSPVVQLVNQILQNAVQMRASDIHLDPQETKFIVRYRVDGILRTERVLPKSMQSVLVARIKIMANLDITEHR IPQDGRIKIDVDFHPVDIRVSTLPTVFGEKIVLRILDLSTAIHDIRQLDFNKLNLKRFTQLIHRPNGIILITGPTGSGKS STLYAALNHLNDEQVNIITVEDPVEYQIEGVNQIQVNPAVGMTFGKGLRAILRQDPNIIMVGEIRDKETAEIAIRASLTG HLVLSTLHTNDALGTITRLIDMGVEPFLVATSLSGVVSQRLVRKVCRDCAEEQVPTKREIEIFKKRGIKIEKIIRGRGCG NCNMTGYKGRMAIQELLMINENIRRGIMNGEPLSKLREYAIQNKTIFLLDDGLLKVKQGLTTTEEVLRVALPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-88 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-88 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_004569315.1 | type II secretion system protein E | VFG0182 | Protein | 1e-88 | 49 |
| pilB | YP_004569315.1 | type II secretion system protein E | VFG2048 | Protein | 1e-88 | 44 |
| pilB | YP_004569315.1 | type II secretion system protein E | VFG0112 | Protein | 6e-85 | 42 |
| pilB | YP_004569315.1 | type II secretion system protein E | VFG1880 | Protein | 4e-82 | 42 |
