Gene Information

Name : xerD (BCO26_1611)
Accession : YP_004569056.1
Strain : Bacillus coagulans 2-6
Genome accession: NC_015634
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1657203 - 1658096 bp
Length : 894 bp
Strand : -
Note : PFAM: Phage_integrase; Phage_integr_N

DNA sequence :
ATGGAAGATCAAATCAAAGATTTCATGCATTTTATGATCGTTGAAAAAGGGCTTGCTGAAAATACGGTCGCGTCCTACAA
ACGCGATCTGCACAATTATCTCCGCTATCTGCAAAAAGTGGAGCTTGTTTCATCCTGGAATGAAGTGACACGGTTTCACA
TCCTCCATTTTCTGAACTTTTTAAAACAGCAGGGAAAGTCCTCGAAGACGATTGCCAGGCATGTCGCCTCCATCCGGTCT
TTTCATCAGTTTTTGTTGCGGGAAAAATTTGCGGGCCAGGATCCGACTGTCCATATTGAAACCCCGAAGCCCGAGCGGAC
GCTCCCGAAAGTGCTGAGCGTTCAGGAAGTGGAAGCGCTCCTTGCCGCGCCAAAAGGGGATACGCCCCTTCATATGCGGG
ATGCTGCGATGCTTGAACTGCTGTATGCAACCGGCATGCGCGTCAGTGAGATGACCGGCCTTAATCTTGATGATTTGCAT
TTATCGATGGGATTTATAAAATGTATCGGAAAAGGGGACAAGGAAAGGATCATCCCGGTCGGCCGCACGGCGTCGGCTGC
ACTTGACCGGTATTTAAAAGAAGGGCGCCCCAAACTGGTTTCAAAAACAACAAGAACGGATGCCCTGTTTTTGAACCATC
ACGGCGCCCGTCTCTCACGGCAAGGCTTTTGGAAAATATTAAAGGCGCTTGCGAAAAAAGCCAATATTGAAAAAGACATC
ACCCCGCACACACTGAGGCATTCATTTGCCACCCATCTGATTGAAAACGGGGCAGACTTGCGGGCGGTACAGGAAATGCT
CGGCCATGCCGACATTTCCACAACACAAATTTACACCCATGTTTCAAAAACGAGGTTAAAGGATGTCTATGCGAAATTCC
ATCCAAGGGCTTAA

Protein sequence :
MEDQIKDFMHFMIVEKGLAENTVASYKRDLHNYLRYLQKVELVSSWNEVTRFHILHFLNFLKQQGKSSKTIARHVASIRS
FHQFLLREKFAGQDPTVHIETPKPERTLPKVLSVQEVEALLAAPKGDTPLHMRDAAMLELLYATGMRVSEMTGLNLDDLH
LSMGFIKCIGKGDKERIIPVGRTASAALDRYLKEGRPKLVSKTTRTDALFLNHHGARLSRQGFWKILKALAKKANIEKDI
TPHTLRHSFATHLIENGADLRAVQEMLGHADISTTQIYTHVSKTRLKDVYAKFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-54 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-54 42