Gene Information

Name : BCO26_1333 (BCO26_1333)
Accession : YP_004568778.1
Strain : Bacillus coagulans 2-6
Genome accession: NC_015634
Putative virulence/resistance : Unknown
Product : TnpA protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 1384254 - 1385576 bp
Length : 1323 bp
Strand : -
Note : PFAM: Transposase_12

DNA sequence :
ATGTCAGACTTATTATCCCTACCAGACATTAAAACAATAGAACCACCACAAGAAAATGAAACCGATATGATGTTTAAAGT
TGAAGCAGTCGGACCACCTGAACGTTGTCCTGAATGTGGTTTTGACAAGTTGTACAAACACAGTTCAAGAAATCAACTAA
TTATGGATTTGCCCATTCGTTTAAAGCGAGTGGGCTTACAATTGAACCGTAGACGATACAAATGTCGTGAATGCGAATCT
ACCTTCTGGGAACGCCTAGTATCTGTAGATGAAAAGCGTAGTATGACCAAAAGGCTTTTAAAGTCTATTCAAGAGCAATC
TATGTCTAAGACCTTTGTAGAAGTCGCAGAAAGCGTTGGCGTTGACGAGAAAACTATTAGGAACGTTTTTAAGGACTATG
TGGCACTCAAAGAACGTGAATACCAGTTTGAAACTCCTAAGTGGCTTGGGATAGACGAGATACATATTATCCGAAGACCT
CGGCTTGTATTGACTAATATTGAACGCAGGACTATTTATGACATCAAGCCTAACCGTAACAAGGAAACAGTCATCCAACG
TCTTTCAGAAATCAGTGACAGGACTTATATTGAGTACGTCACAATGGATATGTGGAAGCCCTACAAAGACGCAGTGAACA
CTATCCTTCCACACGCTAAAGTGGTCGTAGATAAGTTTCATGTAATTAGAATGGCTAATCAAGCCTTAGATAACGTCAGA
AAGTCTTTGAAAGCTCATATGAGCCAAAAAGAAAGACGTACCCTTATGCGTGAAAGGTTTATCCTTCTAAAGCGTAAACA
CGATCTAAATGAACGTGAATCATTCCTCTTAGAGACTTGGTTAGGTAATCTTCCTGCCTTAAAAGAAGCCTATGAACTCA
AAGAAGAGTTTTACTGGATATGGGATACTCCTGATTCAGATGAAGGTCGTCTTCGTTATAGTCAATGGAGACACCGTTGT
ATGTCCAGTAACTCTAAAGATGCATATAAAGACCTCGTGAGAGCCGTAGACAACTGGCATGTCGAAATATTCAACTACTT
TGATAAAAGGCTCACTAACGCTTATACGGAGTCAATTAACAGCATTATTAGGCAGGTAGAGCGAATGGGTAGAGGTTACT
CGTTTGATGCCTTACGAGCCAAAATCCTTTTCAATGAGAAGCTCCATAAAAAGCGTAAGCCACGATTTAATTCAAGTGCT
TTCAATAAAGCTATGTTACACGATAATTTCAATTGGTATGAAGTGAATGATCATAACATTACAGACAACTTTGGTGTCGA
TTTTTCCACACTTATTAAGAATTTGGAGAAGGGTGATTTATAA

Protein sequence :
MSDLLSLPDIKTIEPPQENETDMMFKVEAVGPPERCPECGFDKLYKHSSRNQLIMDLPIRLKRVGLQLNRRRYKCRECES
TFWERLVSVDEKRSMTKRLLKSIQEQSMSKTFVEVAESVGVDEKTIRNVFKDYVALKEREYQFETPKWLGIDEIHIIRRP
RLVLTNIERRTIYDIKPNRNKETVIQRLSEISDRTYIEYVTMDMWKPYKDAVNTILPHAKVVVDKFHVIRMANQALDNVR
KSLKAHMSQKERRTLMRERFILLKRKHDLNERESFLLETWLGNLPALKEAYELKEEFYWIWDTPDSDEGRLRYSQWRHRC
MSSNSKDAYKDLVRAVDNWHVEIFNYFDKRLTNAYTESINSIIRQVERMGRGYSFDALRAKILFNEKLHKKRKPRFNSSA
FNKAMLHDNFNWYEVNDHNITDNFGVDFSTLIKNLEKGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 2e-100 46
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 2e-74 41
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 2e-74 41
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 2e-74 41
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 2e-74 41
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 3e-74 41
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 3e-74 41
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 3e-74 41