Gene Information

Name : fliI (BCO26_1134)
Accession : YP_004568579.1
Strain : Bacillus coagulans 2-6
Genome accession: NC_015634
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1187779 - 1189104 bp
Length : 1326 bp
Strand : +
Note : PFAM: ATP-synt_ab; ATP-synt_ab_N

DNA sequence :
ATGAAAGCAACCGATCTCTTAGACTATATACCCGAAATTGGGACGTTTAAACATTACGGAAAAGTAAAAAGAGTGATCGG
CTTAATGATCGAATCACTCGGGCCGGAAAGCTCCATCGGTGACGTCTGTTATATTCATGTGGATAACAAAAAAAATACGA
AAAAAATCATTGCCGAAGTTGTCGGGTTCCGTGACGGGAATGTTATTTTAATGCCTTATACGAACATCCAAGAAATTTCT
CCCGGCAGCCTTGTGGAAGCAACAGGGAAACCGATGCGGGTGAAAGCAGGCCCACGGCTGTTGGGGAAAGTCATTGATCC
TTTGGGCGTGCCGCTCGACCATTCCCCGCTTCCCGCCGGCCTAAAACCGATTCCGATCGACCGGACGCCCCCCAACCCGC
TCAAGCGCCCGCCGATCAGGGAACCGATTGAGCTTGGCGTCCGCGCGATCGACAGTCTGCTGACGGTTGGAAAAGGCCAG
CGGATCGGCATTTTTGCCGGAAGCGGCGTCGGCAAAAGCACCCTGCTCGGCATGATTGCACGCAACACAAATGCCGACCT
GAATGTGATCGCCCTGATCGGGGAGCGGGGCAGGGAAGTAAGGGAATTTATTGAGCACGACCTCGGCCCGGAAGGTTTAA
AAAAGTCCATTGTTGTCGTGGCAACAAGCGACCAGCCGGCATTGATGCGGATTAAAGGCGCCTATACGGCAACAGCGATT
GCGGAATATTTCAGAGACCGGGGCCTTAATGTCATGTTTATGATGGACTCGGTTACCCGGGTCGCGATGGCCCAGCGAGA
AGTCGGGCTGGCAACGGGGGAACCGCCGGCTACAAAAGGATATACCCCGTCCGTTTTCGCGATTTTGCCGAAACTTTTGG
AAAGGACCGGAACAAATGAGTCCGGCACGATTACCGGGATCTACACCGTGCTTGTCGACGGGGATGATTTGAATGAACCG
ATTGCCGATACGGTGCGCGGCATTTTAGACGGGCATTTTGTTCTGGACAGGGATTTGGCAAATAAAGGGCAATACCCGGC
TATCAATATTTTAAAAAGCGTTAGCCGACTGATGAGCCAACTTGCCAGTCCTGCACACAAAAAAGCCGCAGAAAAGATTC
GCGAACAGTTAAGCACTTATTTGAATTCAGAGGACCTGATCAATATCGGCGCTTATAAACCGGGCGCATCAAAAGAAATT
GATGAAGCGATCGAACGCTATCCGAAAATCGTTTCTTTTATCAAACAAAGCACCGACGAAACCTATAGTATGGAAAGCAG
TATCCGGGCTTTAATCGGACTTGCGGAAACGGGTGAGTGGGCATGA

Protein sequence :
MKATDLLDYIPEIGTFKHYGKVKRVIGLMIESLGPESSIGDVCYIHVDNKKNTKKIIAEVVGFRDGNVILMPYTNIQEIS
PGSLVEATGKPMRVKAGPRLLGKVIDPLGVPLDHSPLPAGLKPIPIDRTPPNPLKRPPIREPIELGVRAIDSLLTVGKGQ
RIGIFAGSGVGKSTLLGMIARNTNADLNVIALIGERGREVREFIEHDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAI
AEYFRDRGLNVMFMMDSVTRVAMAQREVGLATGEPPATKGYTPSVFAILPKLLERTGTNESGTITGIYTVLVDGDDLNEP
IADTVRGILDGHFVLDRDLANKGQYPAINILKSVSRLMSQLASPAHKKAAEKIREQLSTYLNSEDLINIGAYKPGASKEI
DEAIERYPKIVSFIKQSTDETYSMESSIRALIGLAETGEWA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-97 50
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-91 50
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-99 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-97 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-99 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-97 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-99 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-99 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-100 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-99 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-99 49
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 7e-84 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 7e-84 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-84 48
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-84 48
escN CAC81862.1 EscN protein Virulence LEE II Protein 6e-84 48
escN AAC38383.1 EscN Virulence LEE Protein 3e-84 48
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-82 48
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-84 48
escN AAK26715.1 EscN Virulence LEE Protein 2e-83 48
escN AAL57542.1 EscN Virulence LEE Protein 2e-83 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-83 48
escN AAC31513.1 L0034 Virulence LEE Protein 7e-84 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-83 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-84 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-84 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-87 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-88 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-88 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-87 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-88 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-72 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 6e-78 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-70 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-74 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 7e-80 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-74 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_004568579.1 FliI/YscN family ATPase VFG2144 Protein 5e-104 52
fliI YP_004568579.1 FliI/YscN family ATPase VFG0048 Protein 2e-100 51
fliI YP_004568579.1 FliI/YscN family ATPase VFG0390 Protein 7e-98 49
fliI YP_004568579.1 FliI/YscN family ATPase VFG0192 Protein 2e-98 49
fliI YP_004568579.1 FliI/YscN family ATPase VFG1254 Protein 6e-97 49
fliI YP_004568579.1 FliI/YscN family ATPase VFG0730 Protein 2e-84 48
fliI YP_004568579.1 FliI/YscN family ATPase VFG0812 Protein 4e-84 48
fliI YP_004568579.1 FliI/YscN family ATPase VFG2499 Protein 5e-91 48
fliI YP_004568579.1 FliI/YscN family ATPase VFG2331 Protein 2e-88 47
fliI YP_004568579.1 FliI/YscN family ATPase VFG0515 Protein 8e-88 46
fliI YP_004568579.1 FliI/YscN family ATPase VFG1008 Protein 2e-71 42
fliI YP_004568579.1 FliI/YscN family ATPase VFG2459 Protein 4e-74 41
fliI YP_004568579.1 FliI/YscN family ATPase VFG1778 Protein 8e-70 41