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Name : VAA_00653 (VAA_00653) Accession : YP_004564681.1 Strain : Genome accession: NC_015633 Putative virulence/resistance : Virulence Product : General secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 47284 - 49317 bp Length : 2034 bp Strand : - Note : - DNA sequence : GTGAAGCATTGGTTAAACAAAACGACGTGGTTATTGATGGGTGGCTTGTTGTCATCGCCGTTAGCCATGGCAAACGATTT TAGTGCCAGCTTTAAAGGCACCGATATTCAAGAATTCATCAATATCGTGGGCCGTAATCTTGAAAAAACAATCATTGTTG ATCCTTCCGTTCGGGGGAAGGTTGATGTCCGCAGCTATGACACACTTAATGAAGAGCAATACTACAGCTTCTTTTTGAAT GTATTGGAAGTGTATGGTTTTGCCGTGGTGGAAATGGACAACGGCGTGCTCAAAGTGATCAAGTCGAAAGATGCCAAAAC GTCTGCGATTCCTGTCGTTGGCGATGAAGGAAAAGAGAACGGTGATAGCGTGATCACGCGCGTTGTTGCGGTGCGGAATG TTTCGGTACGAGAGCTTTCACCTTTGCTGCGCCAGTTGATCGATAACGCAGGAGCGGGCAACGTAGTGCATTATGATCCG GCGAACATTATTTTGATTACAGGTCGTGCTGCGGTCGTCAACCGTTTAGCCGATATCATCAAACGAGTTGACCAAGCTGG TGACAAAGACATCGAGGTTGTGGAACTAAGTAATGCATCTGCCGCTGAAATGGTGCGTATTGTGGAGGCATTAAACAAAA CCACGGATGCCAAAAATACTCCAGAGTTTTTGCAGCCTAAGCTGGTGGCCGATGATCGTACCAATTCGATTTTGATCTCA GGTGATCCTAAAGTCCGTGAACGTCTAAAGCGATTGATCACTCAGCTTGATGTTGAGATGGCAACAAGAGGCAATAACCG CGTCATTTATCTAAAGAATGCGAAAGCGGAAGATTTGGTTGATGTGCTGAAAGGAGTGTCTGACAACTTGCAGGCTGAAA AACAGTCTGGGCAAAAAACGGGGCAAAGTTCACAACGCACCGAAGTGATGATTTCAGCACATGCACCGACCAATTCCTTA ATTGTTACCGCTCCGCAAGACATCATGAAAGAACTAGAAGATGTGGTTGCGCAGTTGGATATTCGTCGCGCTCAGGTATT GATTGAAGCGCTGATTGTTGAAATGGCCGAAGGGGATGGCATCAACTTAGGCGTGCAATGGGGCTCACTCGATAACGGCT CTGTGATTCAGTATGGCAACGCGGGCGCGCCAATCGGTAAGGTAATGATTGGTTTAGAAGAAGCCAAAGATAGCGTTGAG AAAAAACCGATTCGAGATAGCTCAAAAAGCGAAATAAAATACTACGAAGAAACAACGAAGAAAGGGGATTACTCTACTTT GGCGTCAGCGCTCGGTGCGGTCAATGGTGCAGCCATGAGCTTAGTGATGGGCGACTGGACGGCCCTTATCAGCGCCGTGT CGAGTGACTCCAACTCGAACATCTTGTCATCACCGAGTATTACGGTGATGGATAATGAAGAAGCCTCCTTCATCGTGGGC GAAGAGGTGCCTGTTTTGACAGGTTCGAGCGCGGGCGCAAATAACGATAATCCTTTCCAAACCGTAGAACGCAAAGAGGT CGGTATCAAGCTGAAAGTGGTACCACAAATCAACGAAGGCGACTCAGTTCAATTGAAAATTGAGCAGGAGGTATCCAACG TATTAGGAGCGAATGGTGCCGTCGATGTCCGTTTTGCAAAGCGTCAATTAAACACATCGGTCATCATTCAAGACGGGCAA ATGTTAGTTCTGGGGGGGTTGATTGATGAGCGCGCGGTCGAAAGTGAATCCAAAGTCCCACTATTAGGCGATATACCGGT TTTAGGCTATTTGTTCAAATCGACCAGTACCCAAGTTGAGAAGAAAAACCTGATGGTCTTTATTAAGCCGACCATCATTC GTGATGGCATGACGGCCGATGGCATCACTCAGCGTAAGTACAACTACATTCGTGCAGAGCAGCTCTATAACGCTGATCGC GGTTTGAAGTTGATGGCGAACGACAATATTCCTGTGCTGCCTAAGTTTGGCGATGAGCGCACCCATTCTGCGGAAGTACA AGCCTTTATCGAACAAATGGAAAAACAGCAATGA Protein sequence : MKHWLNKTTWLLMGGLLSSPLAMANDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKVDVRSYDTLNEEQYYSFFLN VLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVVGDEGKENGDSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDP ANIILITGRAAVVNRLADIIKRVDQAGDKDIEVVELSNASAAEMVRIVEALNKTTDAKNTPEFLQPKLVADDRTNSILIS GDPKVRERLKRLITQLDVEMATRGNNRVIYLKNAKAEDLVDVLKGVSDNLQAEKQSGQKTGQSSQRTEVMISAHAPTNSL IVTAPQDIMKELEDVVAQLDIRRAQVLIEALIVEMAEGDGINLGVQWGSLDNGSVIQYGNAGAPIGKVMIGLEEAKDSVE KKPIRDSSKSEIKYYEETTKKGDYSTLASALGAVNGAAMSLVMGDWTALISAVSSDSNSNILSSPSITVMDNEEASFIVG EEVPVLTGSSAGANNDNPFQTVERKEVGIKLKVVPQINEGDSVQLKIEQEVSNVLGANGAVDVRFAKRQLNTSVIIQDGQ MLVLGGLIDERAVESESKVPLLGDIPVLGYLFKSTSTQVEKKNLMVFIKPTIIRDGMTADGITQRKYNYIRAEQLYNADR GLKLMANDNIPVLPKFGDERTHSAEVQAFIEQMEKQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-164 | 55 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-156 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAA_00653 | YP_004564681.1 | General secretion pathway protein D | VFG2047 | Protein | 3e-152 | 53 |
