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Name : VAA_00652 (VAA_00652) Accession : YP_004564680.1 Strain : Genome accession: NC_015633 Putative virulence/resistance : Virulence Product : General secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 45788 - 47287 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGACCGAAGTTTTGTCGCAACCTCACTACCGTCGTTTACCGTTTAGCTTTGCCAATCGTTTTAAATTGGTATTAGAGCT GGTAGAAGACAACGAGCTGCCGACGTTATTTTATGTCGCTCCGCTGGCTATCGAATCATTAGTCGAAGTGAAACGAGTCG TGAAACAGCCGCTCAACTTGGTTGAAATTTCACTGGCCGAATTTGAAAGTAAGTTGACCCAAGCTTACCAACGAGACTCG TCAGAAGCGCGACAATTAATGGAAGATATCGGTGCTGACAGTGATGATTTCTTCTCATTAGCCGAAGAGCTGCCGCAAAA TGAAGATTTGTTAGAGTCAGAAAACGATGCGCCCATCATCAAATTGATCAACGCCATGCTTGGCGAAGCGATCAAAGAGG GCGCGTCGGATATTCACATTGAAACCTTTGAGAAAATCTTGTCGATTCGTTTTCGTGTCGATGGGGTACTGCGTGAAGTG TTAGCGCCGAGTCGTAAATTAGCGCCGTTGCTGGTTTCACGCGTCAAAGTAATGGCTAAGCTTGATATCGCTGAAAAACG TGTACCACAAGATGGACGCATTTCATTACGCATTGGCGGCCGAGCGGTCGATGTTCGCGTGTCAACCATGCCTTCGTCTC ACGGTGAGCGTGTGGTGATGCGTTTGCTAGATAAAAACGCCACGCGCTTAGATCTGCACAGTCTAGGAATGACAGCAGCC AACCACGAAAGCTTCCGTCAATTAATCAAACGACCGCATGGCATTATTTTGGTGACGGGCCCAACCGGTTCAGGAAAATC CACCACCTTGTACGCTGGCCTGCAAGAACTCAACAGCAACGAGCGTAATATTTTAACCGTGGAAGACCCGATTGAGTTCG ATATTGATGGTATTGGCCAAACTCAAGTCAATCCTAAAGTGGACATGACTTTTGCGCGAGGATTACGTGCTATTTTGCGT CAAGACCCGGATGTGGTCATGGTTGGGGAAATTCGTGATTTAGAAACCGCGCAGATTGCGGTGCAAGCGTCTTTAACCGG ACACTTGGTGATGTCGACTTTGCATACCAATACCGCCATCGGTGCGATAACACGTTTGCGCGATATGGGAATTGAACCCT TTTTGATCTCATCATCGCTGCTTGGCGTATTGGCACAACGCTTAGTGCGTACCTTATGTCCAGATTGCAAAGAGGCCTAC CAAGCAGACAATGAGCAGAAAAAACTGTTCAATTGTAAGAAAAAAGAGTTGCTGACACTGTATCGTCCGAAGGGCTGTGA CAAATGCAATCACAAAGGGTATCGAGGCCGAACGGGTATACATGAATTGTTGCTGATTGATGATGAGGTACAAGCCTTAA TTCATAGCGAAGCCGGAGAGCAAGCAATTGAAAAAGCGGTGCGGGCGAAAACACCGAGCATTCGTGATGACGGGCTTGAT AAAGTGCTGAAAGGCATTACCTCACTTGAAGAAGTGATGCGAGTGACGAAGGAAGCATAA Protein sequence : MTEVLSQPHYRRLPFSFANRFKLVLELVEDNELPTLFYVAPLAIESLVEVKRVVKQPLNLVEISLAEFESKLTQAYQRDS SEARQLMEDIGADSDDFFSLAEELPQNEDLLESENDAPIIKLINAMLGEAIKEGASDIHIETFEKILSIRFRVDGVLREV LAPSRKLAPLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAA NHESFRQLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILR QDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEAY QADNEQKKLFNCKKKELLTLYRPKGCDKCNHKGYRGRTGIHELLLIDDEVQALIHSEAGEQAIEKAVRAKTPSIRDDGLD KVLKGITSLEEVMRVTKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-162 | 69 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-162 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAA_00652 | YP_004564680.1 | General secretion pathway protein E | VFG2048 | Protein | 2e-161 | 68 |
| VAA_00652 | YP_004564680.1 | General secretion pathway protein E | VFG0182 | Protein | 5e-146 | 63 |
| VAA_00652 | YP_004564680.1 | General secretion pathway protein E | VFG1876 | Protein | 9e-135 | 57 |
| VAA_00652 | YP_004564680.1 | General secretion pathway protein E | VFG0112 | Protein | 3e-90 | 47 |
| VAA_00652 | YP_004564680.1 | General secretion pathway protein E | VFG0233 | Protein | 3e-84 | 47 |
| VAA_00652 | YP_004564680.1 | General secretion pathway protein E | VFG2426 | Protein | 2e-76 | 46 |
