Gene Information

Name : VAA_00279 (VAA_00279)
Accession : YP_004567227.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 2816080 - 2817612 bp
Length : 1533 bp
Strand : +
Note : -

DNA sequence :
ATGGCCAAAAAGAGAACTCCAATGAACAAAATCAAAGAGGTATTACGCCTTAAGTACGACTGCGGTCTCTCCAATCGTGG
TATCGCTTCTTGCCTGAAACTCGGCCCGTCCACCATATCGGAACTCCTTACTCGCTTTAAACAAAGCCAACTTGGCTGGC
CTCTACCCGAAAGTTGCAGCGATGCTGATCTCACGCAAGCGCTGTATCACGGCAAGAAAGCCAGTCGCGATAAAGTCATG
CCAGACTTCACTCAATACGCAGTCGAACTCAGACGTAAAGGCATGACAAAGATGTTGTTGTGGCAGGAATACCATGAGCA
ATATCAAGAACAAGCTTACGCTTACACTCAGTTCTGCGAGCACTTCACTCGTTGGTTCAAAACTCAAAAGCGCAGCATGC
GCCAGCTCCATGTGGCAGGTGACAAGCTGTTTATCGATTACTGTGGGCCTCGGCTTCAAGTGGTCAACCCTGATACAGGT
GAAGTGCGCGAAGCAGAAGTGTTCGTGGCGACCTTAGGTGCGTCCAATTACACCTATGTTGAAGCCTTCCCGAGTCAAGG
TAAGTCTTACTGGTTAGAGGCGCATGCCAATGCGTTCGAGCACTTCGGTGGTGTACCACAGCTCTTGGTTCCCGATAATC
TACGTAGCGCGGTCACCAAAGCCAATCGTTATGAGCCGAGACTTAACGACAGTTATCAAAAACTGGCGAATCACTATCAA
ACCGCAGTGATGCCAGCTCGCCCTTACAAACCGAAAGACAAAGCCAAGGCAGAGAATGCCGTGCTCCTAGTGGAACGCTG
GATCATGATGCGACTACGACATCAAACCTTCCATACCTTCAAAGAGCTGAACCTTGCCATCCGTGAGCTTATGAATGACT
TAAACGAACGTGAGATGAAACAGTATGGTGCGAGCCGCAAAGCGCTTTTCGACAAACTCGATAAGCCAGCGTTAAAGCCG
CTACCTAAGCAGCGATACCTCTATACCGAAACCAAGCGAGCCAAGGTTGGGCCTGATTATCACATAGAATGTCGCCGCCA
CTACTACTCGGTGCCACATCAACTTGTTGGTCACCATGTCGAACTGGAAGCCTCCAACCGTCTGGTGCAGATCTACCATC
AAGGTAACTTGGTAGCCCAGCATCCACGCAGCCAAAGAGAGCGCGGAAACAGCACCCAACCAGAGCACATGCCGAGTAAT
CATCAACATCAGAAGTGGTCGCCTGGACGCCTGCTCAACTGGGGAGCCAATATCGGCCCAGCCACACGAGAAGTCATCAA
TAAGATGCTCTACTCCAAGCCTCATCCAGAGCAGTCGTATCGCTCCTGCCTTGGGCTGCTCAATCTGAGTAAAGCGCATG
GCGAGTCGCGCTTAGAGCAAGCCTGTAAAGATGCGCTGATGCTGACAAAACCGAACTACACCTTCATCAACAATCTGCTG
AAGAACAATCGTGAAGGACAACTGAGCAAAGACAACACGAGCACGCCGAACCTTGTTCATAGCAATGTCCGTGGCCCGAA
CTGTTATCACTAG

Protein sequence :
MAKKRTPMNKIKEVLRLKYDCGLSNRGIASCLKLGPSTISELLTRFKQSQLGWPLPESCSDADLTQALYHGKKASRDKVM
PDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCEHFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTG
EVREAEVFVATLGASNYTYVEAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQ
TAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNEREMKQYGASRKALFDKLDKPALKP
LPKQRYLYTETKRAKVGPDYHIECRRHYYSVPHQLVGHHVELEASNRLVQIYHQGNLVAQHPRSQRERGNSTQPEHMPSN
HQHQKWSPGRLLNWGANIGPATREVINKMLYSKPHPEQSYRSCLGLLNLSKAHGESRLEQACKDALMLTKPNYTFINNLL
KNNREGQLSKDNTSTPNLVHSNVRGPNCYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 0.0 96
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 1e-96 47
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 1e-96 47
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 9e-97 47