Gene Information

Name : VAA_00204 (VAA_00204)
Accession : YP_004564877.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Unknown
Product : ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 255257 - 257311 bp
Length : 2055 bp
Strand : +
Note : -

DNA sequence :
GTGATCTATCTAGCGTTATATCCTTATGATCAAAATTCCATTTTGATCAACTCTTGTGCATTAATCCGTCAAGCATTTAT
CCCTAGTACAAAAAAGGAAGATGCTATGTCGAGTCGTAAACAAGCGAGACTGGAAGCCAAACAATTCATTGACACATTGT
CTGTCGAACCCTACCCAAATTCCTCTAAAATCTATATTACTGGTTCACGTTCGGATATCCGCGTGCCAATGCGTGAGATT
AAACTAGCTGACAGCTTGGTCGGGGGCACAAAGTCCTCACCGATTTATCAACCGAATGAATCTATATGTGTTTATGACAC
TTCAGGTGTCTATACCGACCCATCTCATACTATCGACTTATATCAAGGTTTGCCTAAATTAAGGGATAAATGGATCGCTG
ATCGGGATGATACCGAGTGGCTTGATGAGGTCAGTTCTGCTTACACTAAAGAACGTTTATCTGATGATACATTGGACGAA
CTACGTTATGGGAACCTGCCAGCCATACGCCGAGCAAAGAAAGGGAAGTGCGTTACTCAACTTCATTATGCGCGGCAAGG
TGTTATCACACCCGAAATGGAATACATTGCCATTCGCGAAAATACGCGACGTGGAGAGTGTATGGATGCACAGCTGAGCC
AGCAACATGCAGGGATTCATTTGGGGGCTAATCTACCAAAGCAAATAACTCCTGAGTTTGTGCGTCGTGAGGTTGCCGAA
GGACGAGCCATTATCCCGTCGAATATTAACCATCCTGAATCAGAGCCGATGATCATTGGTCGTAATTTTCTCGTCAAAGT
GAATGCGAATATCGGTAACTCATCTGTCTCTTCATCAATTGAAGAAGAGGTTGAAAAATTAGTATGGGCAACCCGCTGGG
GTGGGGATACCGTGATGGATCTTTCTACTGGTCGCAATATTCACGAAACTCGAGAATGGATTTTGCGTAATAGCCCCGTA
CCGATTGGCACTGTGCCTATGTATCAAGCATTGGAAAAAGTAAATGGTATTGCGGAGGATTTATCATGGGAAGTAATGCG
CGATACCTTACTTGAGCAAGCGGAGCAAGGTGTTGATTACTTTACAATTCATGCTGGTTTGTTGCTTCGTTATGTGCCAA
TGACCGCGAAACGTGTTACTGGCATCGTTTCGCGTGGCGGCTCTATTATCGCTAAATGGTGTTTAGCCCATCATACTGAG
AGTTTTCTTTACACTCATTTCCGTGAAATTTGTGAAATTTGCGCCAAGTATGACGTTGCCCTTTCCTTAGGGGATGGACT
ACGGCCAGGATCCATTGCTGATGCTAACGATGAAGCACAATTTGCAGAGCTGCGCACTTTAGGTGAGTTGACCAAAATAG
CGTGGGAATATGATGTACAGGTCATTATTGAAGGCCCTGGCCATATCCCCATGCATTTGATTAAAGAGAATATGGATGAG
CAATTAAAGCATTGCCATGAAGCGCCATTCTATACCTTGGGCCCATTAACTACCGATATTGCTCCGGGATATGATCACAT
CACTTCCGGTATTGGCGCTGCGATGATTGGCTGGTATGGTTGCGCGATGCTTTGCTATGTAACACCGAAAGAGCACCTTG
GTTTACCAAACAAAGAAGATGTTAAAACGGGTTTAATTACTTATAAATTGGCAGCACATGCTGCAGACCTTGCGAAAGGG
CACCCGGGAGCACAAGTGCGCGATAATGCTTTATCGAAAGCACGTTTTGAGTTTCGTTGGGAAGACCAATTCAATCTTGC
ATTAGACCCAGTTACGGCGCGTGCTTTTCACGATGAAACTCTTCCGCAAGAGTCTGGTAAAGTTGCGCATTTTTGCTCTA
TGTGCGGGCCGAAATTCTGCTCGATGAAAATCTCTCAAGAGGTTCGAGAGTATGCGCTAGATACCAAGCAAGTTGCTGCT
GATGCGCTCATTTCCGTTACGCTGCTAGATGACCCGTTACAAGGCATGAGACAGAAATCGCAAGAGTTTAAAGCCTCAGG
ATCAGAGCTTTATCATCCTGCTGTTAGTCAACAGTCAGTCGTTAGCGAGGAGTAA

Protein sequence :
MIYLALYPYDQNSILINSCALIRQAFIPSTKKEDAMSSRKQARLEAKQFIDTLSVEPYPNSSKIYITGSRSDIRVPMREI
KLADSLVGGTKSSPIYQPNESICVYDTSGVYTDPSHTIDLYQGLPKLRDKWIADRDDTEWLDEVSSAYTKERLSDDTLDE
LRYGNLPAIRRAKKGKCVTQLHYARQGVITPEMEYIAIRENTRRGECMDAQLSQQHAGIHLGANLPKQITPEFVRREVAE
GRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPV
PIGTVPMYQALEKVNGIAEDLSWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLAHHTE
SFLYTHFREICEICAKYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTKIAWEYDVQVIIEGPGHIPMHLIKENMDE
QLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKG
HPGAQVRDNALSKARFEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYALDTKQVAA
DALISVTLLDDPLQGMRQKSQEFKASGSELYHPAVSQQSVVSEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 70
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 70
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 66