Gene Information

Name : VAA_00728 (VAA_00728)
Accession : YP_004567140.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Virulence
Product : PilD
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : -
Position : 2728569 - 2729450 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGTTTTTATTTATTACCCTTGGCTCTTTCCACTTTTTGCAGCGTTGTTTGGCTTAATCGTGGGGAGTTTTCTCAA
TGTGGTCATTTATCGTCTACCCAAAATCATGGAGCGAGAATGGCGACAAGAGTGCGCTGACTGCTTTCCCGAATATCACA
TTGCGCCACCGGAAGGGCAACTCACGCTCAGTGTCCCTCGTTCTAGCTGCCCACACTGTGATACGCCAATCCGTATTATT
GATAATATTCCGCTACTCAGTTGGCTCTTTCTAAAAGGGAAATGTTCCCGTTGCCAAGGCCCGATCAGTGCACGCTATCC
TTTGATTGAACTGCTCACCGCCAGTATGAGCTTTGTCGTGGCTAGCCACTTCGGTTTTAGTTATTTTTCACTAGCGCTAT
TGTTTTTCACTTTTGTGCTCATCGCGGCGACGTTTATCGATTTCGATACCATGCTGTTACCCGACAAGCTGACACTGCCA
CTACTGTGGGCGGGCCTCAGCTTATCATTGATGCACATTAGCCCAGTCAGTTTGCAAGATGCGGTGATCGGCGCCATTGC
TGGCTATCTGAGCTTATGGTCGGTCTATTGGCTGTTTAAACTCGTCACAGGCAAAGAAGGAATGGGTTATGGCGATTTCA
AACTGCTGGCTGCTCTCGGCGCTTGGTTGGGCTGGCAATATCTGCCCATCATCATTCTCATGTCATCTGTGGTTGGCATT
GTCTTTGGCCTAATTCAATTGCGCTTGCAAAAAAAAGGGATCGACAAAGCCTTTCCTTTTGGCCCCTATCTCGCCATTGC
TGGCTGGCTAACCTTGTTGTGGGGTAACGATATTATGAGTTGGTATTTAGGTTCAATTATGGGGTTATCGTCATGGGGTT
AG

Protein sequence : 
MEVFIYYPWLFPLFAALFGLIVGSFLNVVIYRLPKIMEREWRQECADCFPEYHIAPPEGQLTLSVPRSSCPHCDTPIRII
DNIPLLSWLFLKGKCSRCQGPISARYPLIELLTASMSFVVASHFGFSYFSLALLFFTFVLIAATFIDFDTMLLPDKLTLP
LLWAGLSLSLMHISPVSLQDAVIGAIAGYLSLWSVYWLFKLVTGKEGMGYGDFKLLAALGAWLGWQYLPIIILMSSVVGI
VFGLIQLRLQKKGIDKAFPFGPYLAIAGWLTLLWGNDIMSWYLGSIMGLSSWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 6e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_00728 YP_004567140.1 PilD VFG0114 Protein 3e-50 56
VAA_00728 YP_004567140.1 PilD VFG1882 Protein 1e-44 48
VAA_00728 YP_004567140.1 PilD VFG2428 Protein 4e-27 48
VAA_00728 YP_004567140.1 PilD VFG0234 Protein 3e-34 46