|
Name : VAA_00440 (VAA_00440) Accession : YP_004566966.1 Strain : Genome accession: NC_015633 Putative virulence/resistance : Virulence Product : ClpV protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2532085 - 2534676 bp Length : 2592 bp Strand : - Note : - DNA sequence : GTGAGGAAAGTTGGTATGCGTCTTGATCGATTTACAAGCAAATTTCAAATTGCCATTTCTGATGCTCAATCATTGGCATT AGGCCGTGATCATCAATATATCGAGCCTGTTCATTTGATGGTGGCATTGCTCGATCAAAATGGCAGTCCAATTCGTCCAC TTCTTACTATGTTAAGTGTGGACGTTATGCAATTGCGCTCGAAGCTCAGTGAGATATTAGACCGTTTGCCAAAAGTTAGC GGTATCGGTGGTGATGTTCAGCTTTCTAGCGCAATGGGTACTATGTTCAATTTGTGCGATAAACTCGCGCAAAAACGGCA AGATTCCTACATTTCTTCGGAAGTATTTTTGCTAGCCGCACTAGAAGATAAGGGCGCGCTTGGTCAATTACTCAAAGAAA TAGGGCTTACCGAGAAAAAAGTTTCTGAAGCAATAGAAAAAGTGCGTGGAGGTCAGAAAGTGAATGATCCAAATGCAGAA GAGCTAAGACAAGCGCTTGAGAAATTCACAATAGATCTAACTGAACGAGCGGAACAAGGCAAACTTGATCCTGTCATCGG GCGTGATGATGAAATTCGTCGCACCATTCAAGTATTGCAACGCCGGACCAAAAACAACCCCGTGATTATTGGTGAGCCCG GTGTAGGTAAAACGGCGATTGTGGAAGGGTTAGCGCAGCGCATTATTAATAATGAAGTACCAGAAGGTCTACGTGGCCGT CGAGTATTGTCATTAGACATGGGGTCTTTGGTCGCAGGGGCTAAGTATCGTGGTGAATTTGAAGAACGCTTAAAATCGGT GCTTAACGAGCTAGCGAAAGAAGAGGGTAATGTCATCCTCTTTATTGATGAGTTGCACACTATGGTCGGTGCAGGTCGAG GCGAAGGCGCAATGGATGCGGGGAATATGCTTAAGCCAGCTCTGGCTCGAGGAGATCTACACTGCGTCGGTGCGACCACT TTAGACGAGTATCGTCAATATATAGAGAAAGATCCGGCACTTGAGCGACGTTTCCAAAAGGTACTGGTTGATGAGCCTAG CGTAGAAGACACAGTAGCTATTTTGCGTGGTTTGAAAGAGCGCTATGAGCTCCATCACCATGTGGAGATCACCGATCCCG CTATTGTTGCTGCTGCGAGCTTATCGCACCGCTATATTTCTGATCGCCAGTTGCCCGATAAAGCGATTGATTTGATCGAT GAAGCGGCTTCAAGCATTCGTATGCAAATAGATTCGAAACCAGAATCTTTGGATAAGCTTGAGCGTAAAATTATTCAGCT GAAAATTGAACAACAAGCGCTAACGAATGAACACGATGAAGCGAGTGAAAAACGCTTACAGGTGTTAAATGAAGAGTTAA AAGTGAAAGAGCGTGAGTTTGCCGAGCTGGAAGAAGTTTGGAATGCGGAAAAAGCAGCTCTTTCGGGCACTCAGCATATT AAGTCCGAACTAGAACAAGCACGTATGGATATGGATTTCGCACGTAGAGCGGGTGACTTGAACCGTATGTCAGAACTTCA ATACGGTCGAATTCCTGAGCTTGAAAAGCAGCTCGACCTTGCAACTCAAGCTGAAATGCAAGAGATGACTTTGCTGCGCA ACAACGTAACTGATGTAGAAATTGCGGAAGTACTTTCAAAGCAAACTGGTATTCCAGTTTCTAAAATGCTGGAAGCTGAG AAAGAAAAACTGCTGCAAATGGAGGATGCGCTGCATCAACGAGTTATCGGACAAGTTGAAGCCGTCGAAGTGGTATCAAA TGCGATTCGCCGTAGCCGAGCTGGGTTATCTGATCCAAATAGACCGATTGGTTCCTTCTTATTCTTAGGGCCAACTGGTG TGGGTAAAACTGAATTGTGTAAAACACTCGCAAACTTTATGTTTGATAGTGAAGATGCCATGGTGCGAATCGACATGTCT GAGTTTATGGAAAAACACTCAGTAGCACGATTAGTCGGCGCGCCTCCAGGTTATGTGGGCTACGAAGAGGGTGGCTACTT GACCGAGGCTATTCGTCGTAAACCGTACTCGGTTATCTTGTTGGATGAAGTTGAGAAAGCACACCCTGATGTCTTTAATA TCCTGCTACAGGTATTAGATGATGGGCGCTTAACTGATGGACAAGGACGCACAGTTGATTTTCGTAATACAGTGGTAATT ATGACCTCAAACTTAGGGTCTTCGCAAATTCAAGAAAAATTCGCAAGCTTGGATTATGAAGGCATTAAAAAAGAGGTAAT GGAGATTGTAGGTAAGCATTTTAGACCAGAGTTCTTAAACCGAGTGGATGAAAGTGTAGTATTCCATCCGTTGGCGCAAG AACAAATTAAATCGATCGCTTCTATTCAATTAGCCCGTCTTGGTAAACGAATGGAAGAGAAAGGTTATCAGCTTGAGGTA TCTGAAAAAGCGTTAGAGCTGATTTCTCAAGTTGGGTTTGATCCTGTTTACGGAGCAAGGCCATTGAAACGCGCGATTCA ACAAAGCGTTGAAAATCCATTAGCGAAAGAAATCTTGGCAGGAAGAATCCTACCGGATAAAAAAGTTAAGCTAGTTGTTA GCAATGACCAAATTATTGCTCATCAAGACTAA Protein sequence : MRKVGMRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLSVDVMQLRSKLSEILDRLPKVS GIGGDVQLSSAMGTMFNLCDKLAQKRQDSYISSEVFLLAALEDKGALGQLLKEIGLTEKKVSEAIEKVRGGQKVNDPNAE ELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGR RVLSLDMGSLVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATT LDEYRQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLID EAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLQVLNEELKVKEREFAELEEVWNAEKAALSGTQHI KSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNNVTDVEIAEVLSKQTGIPVSKMLEAE KEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMS EFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI MTSNLGSSQIQEKFASLDYEGIKKEVMEIVGKHFRPEFLNRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQLEV SEKALELISQVGFDPVYGARPLKRAIQQSVENPLAKEILAGRILPDKKVKLVVSNDQIIAHQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-163 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAA_00440 | YP_004566966.1 | ClpV protein | VFG0079 | Protein | 4e-139 | 42 |
