Gene Information

Name : VAA_01228 (VAA_01228)
Accession : YP_004566888.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2443323 - 2443523 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence : 
ATGAGATTTCTACGACTAAAAGAAGTGATGTCACTAACAGGACTTGGCCGTTCAACTATCTACAAGTTCATGGCTGATGA
AACAGACTTTCCTAAAAGTGTTCCACTCGGTGGACGAGCGGTAGCTTGGGTCGAAAGTGAAATCGAGGAATGGATGGAAT
CGCGTCTGAGCATGCGAGACAACGCAGAATCCTTTCAGTAA

Protein sequence : 
MRFLRLKEVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWMESRLSMRDNAESFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-25 97
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 4e-13 60
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-13 60
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 4e-13 60
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-13 51
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-13 51
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-13 51
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 2e-09 50
unnamed CAA21398.1 - Not tested HPI Protein 3e-09 50
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 1e-07 48
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 2e-07 45
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 3e-08 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_01228 YP_004566888.1 DNA-binding protein VFG1118 Protein 1e-13 60
VAA_01228 YP_004566888.1 DNA-binding protein VFG1141 Protein 8e-14 51