Gene Information

Name : VAA_01208 (VAA_01208)
Accession : YP_004566868.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Unknown
Product : Phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2422512 - 2423750 bp
Length : 1239 bp
Strand : +
Note : -

DNA sequence : 
ATGGGAACCAGAGCAACTAGACTAACAAGTAAAGCTATTACCAACGCAAAGCCTAAAGAGAAGGATTATGTTCTTTCAGA
CGGCGACGGTTTACAGCTACGAGTTAGGACAAATGGTTCTCGGTTGTGGAACTTCAACTACCGCCACCCTATTACTAAAA
AACGCATCAACATGGGTTTAGGTGCTTTCCCTGAGTTATCTCTCGCTAATGCCCGTAAAAAGACAATAGAAGCAAGGGAG
CTTGTTGCTGATGGCATTGATCCTAAAGAAGCCAGAGATTCAAAGCTTTCTGAAATGCAAAAAGAGCTTGAAGACACATT
ACTCAACTTAGCTAAAGAGTGGTTTGAAAGAAAAAAAGAAAGTGTCACGCCAAACTATGCCGATGATATCTGGCGCTCGT
TAGAACTTCATGTATTCCCGCAAATAGCGAATACACCAGTAAAAGATATCGATGCCCCACTCGTTATTGATCTACTTAGA
CCTATCGAAGCAAAAGGCAGTTTAGAGACGGTTAAACGCTTATCTCAACGCTTAAACGAAATAATGAACTACGCGGCAAA
CTGTGGTCTTGTAAAAGCGAATCCATTAACGGGTATTCGAGCCGCTTTTAAAAAGCCCAAAAAAGAAAACATGGCAGCAC
TAGCACCAGATGAGCTACCAGAGCTCATGGGAGCGATCGCCAATGCCAGTATAAAGCGTACTACTCGTTGTTTAATTGAG
TGGCAACTTCACACCATGACACGACCTTCTGAAGCCGCAGGCGCTAGATGGGATGAGATTGAGTGGGAAGAAAAGATATG
GACCATTCCAGCCGAGAGAATGAAAAAAAGAAGAGAGCACCGCATCCCGCTCACAGAGCAGATGCTGGCGCTATTAGAAG
TAATAAAGCCGATAAGCGGCCACCGTGAATACATCTTTCCTTCAGATCGCGATCCGAAGAAGCCATGTAACAGCCAAACG
GCAAATATGGCTCTAAAACGTATGGGGTTTGCAGGAAGATTAGTTAGCCACGGTCTGCGCTCTCTCGCAAGTACTACACT
CAATGAACAAGGTTTTGACCGTGACTTGATCGAAGCGTCACTGGCACACGTTGATGATAACCAAGTGCGTAGCGCCTATA
ACCGGACTGACTACCTTGAACGTCGCCGGCCAATGATGAGCTGGTGGAGCGGGCATATTGAAACGGCCGCCAAAGGCAGT
CTATCTGTTACTGGGACCAAACAATTAAAAGTTATCTAA

Protein sequence : 
MGTRATRLTSKAITNAKPKEKDYVLSDGDGLQLRVRTNGSRLWNFNYRHPITKKRINMGLGAFPELSLANARKKTIEARE
LVADGIDPKEARDSKLSEMQKELEDTLLNLAKEWFERKKESVTPNYADDIWRSLELHVFPQIANTPVKDIDAPLVIDLLR
PIEAKGSLETVKRLSQRLNEIMNYAANCGLVKANPLTGIRAAFKKPKKENMAALAPDELPELMGAIANASIKRTTRCLIE
WQLHTMTRPSEAAGARWDEIEWEEKIWTIPAERMKKRREHRIPLTEQMLALLEVIKPISGHREYIFPSDRDPKKPCNSQT
ANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDRDLIEASLAHVDDNQVRSAYNRTDYLERRRPMMSWWSGHIETAAKGS
LSVTGTKQLKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20773.1 integrase Not tested VPI Protein 9e-155 74
int AAK20803.1 integrase Not tested VPI Protein 9e-155 74
unnamed AAA82714.1 integrase Not tested VPI Protein 9e-155 74
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-154 74
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-154 74
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-116 56
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 4e-108 54
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 4e-108 54
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 4e-108 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_01208 YP_004566868.1 Phage integrase VFG1092 Protein 2e-108 54