Gene Information

Name : VAA_03116 (VAA_03116)
Accession : YP_004565987.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Virulence
Product : GacA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1441465 - 1442178 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
GTGGGCCGCGATGCTGCTATCCACGATTCAGTGGGTGCAGAGCCAATAGATGAGTGTGGAGATACAAGTTTGATAAGTGT
TTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAATGAACGTAGTAG
GGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGTCGCAGTAATCATGTCGACGTTGTTTTAATGGATATGAACATG
CCTGGTATCGGCGGTTTGGAAGCGACAAAAAAAATTCTGCGCTTTAATCCAGATGTGAAAATCATCGTGTTAACGGTTCA
TACGGAAAATCCATTTCCGACCAAAGTGATGCAAGCTGGAGCCGCGGGTTATTTAACCAAAGGTGCAGGCCCAGATGAAA
TGGTCAACGCGATTCGCATTGTGAATAGCGGGCAGCGTTATATCTCGCCTGAAATCGCACAGCAAATGGCATTAAGCCAA
TTCTCGCCAGCTTCTGACAATCCATTTGCTGATCTCTCGGAAAGAGAGCTGCAGATTATGATGATGATTACCAAAGGGCA
AAAAGTGACGGATATTTCCGAGCAACTTAGTCTTAGCCCCAAAACAGTAAATAGCTATCGCTATCGACTGTTTAGTAAGT
TAGCGATCAGCGGTGATGTTGAACTGACCCATTTAGCTATTCGACACGGAATGTTAGACACCGAGACGCTTTAG

Protein sequence :
MGRDAAIHDSVGAEPIDECGDTSLISVFLVDDHELVRTGIRRIIEDVRGMNVVGEADSGEEAVKWCRSNHVDVVLMDMNM
PGIGGLEATKKILRFNPDVKIIVLTVHTENPFPTKVMQAGAAGYLTKGAGPDEMVNAIRIVNSGQRYISPEIAQQMALSQ
FSPASDNPFADLSERELQIMMMITKGQKVTDISEQLSLSPKTVNSYRYRLFSKLAISGDVELTHLAIRHGMLDTETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-50 51
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-50 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_03116 YP_004565987.1 GacA VFG1889 Protein 4e-55 52