Gene Information

Name : VAA_03286 (VAA_03286)
Accession : YP_004565824.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Virulence
Product : CtrA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1258460 - 1259161 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAATTCTTTTAATTGAAGATGATGCCAGAATTGCCAACTTTATTGAGCGAGGGCTCAAAGCAGAAGGTCACCACAT
TCAGCGACTAAATGATGGGCAATACGCACTTGAAACACTCATAAGCGGCGAGCCCGATATTTTAATTTTAGATCGAATGC
TTCCGCACACCGATGGATTAACTCTTTGTCAGCAAATACGTGAAGCCGGTATTGATGTGCGCATTTTGATGCTTTCTGCA
CTGGGCGAAGTTGAAGAACGGGTTCGGGGCCTACGCATTGGTGCGGATGATTATCTGGCAAAACCTTTTCATTTTGAAGA
GTTACTGGCTCGCCTAGATGCGCTGCAACGTCGACATTCTGACTCTGCGCCAATGCCCACTCTACACATTGCAGACTTAA
CGCTCTGCTTATCAACCATGGCCGTAACACGGGCAGGGCAAGCCATTGAGTTAACCGCCAAAGAACTCTCCATATTAGAG
CTATTGATGCATAAACCCGGTCATATTTTTAGCCGAGAACGGATTCTTGCTAATGTTTGGGGTCTCCATCAAGATCCCCT
AACCAACGTAGTCGATGTGTATATGCGTCGTCTACGCAAAAAAATTGATGACCCTTTCTCATCAGCACTGATTAAAACTA
AACGCGGTATGGGCTATTTTCTCGATAAAAATAGTGGTGAGCAACGCACAGGAAATGGATAA

Protein sequence : 
MRILLIEDDARIANFIERGLKAEGHHIQRLNDGQYALETLISGEPDILILDRMLPHTDGLTLCQQIREAGIDVRILMLSA
LGEVEERVRGLRIGADDYLAKPFHFEELLARLDALQRRHSDSAPMPTLHIADLTLCLSTMAVTRAGQAIELTAKELSILE
LLMHKPGHIFSRERILANVWGLHQDPLTNVVDVYMRRLRKKIDDPFSSALIKTKRGMGYFLDKNSGEQRTGNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_03286 YP_004565824.1 CtrA BAC0125 Protein 1e-41 46
VAA_03286 YP_004565824.1 CtrA BAC0638 Protein 3e-39 46
VAA_03286 YP_004565824.1 CtrA BAC0308 Protein 1e-39 44
VAA_03286 YP_004565824.1 CtrA BAC0083 Protein 5e-42 43
VAA_03286 YP_004565824.1 CtrA BAC0197 Protein 2e-39 42
VAA_03286 YP_004565824.1 CtrA HE999704.1.gene1528. Protein 2e-29 42
VAA_03286 YP_004565824.1 CtrA AE015929.1.gene1106. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_03286 YP_004565824.1 CtrA VFG1390 Protein 2e-38 44
VAA_03286 YP_004565824.1 CtrA VFG0596 Protein 3e-34 41