Gene Information

Name : VAA_03446 (VAA_03446)
Accession : YP_004565671.1
Strain :
Genome accession: NC_015633
Putative virulence/resistance : Virulence
Product : FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1097629 - 1098468 bp
Length : 840 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGCTGGTGGCATTATTGTTTACCCCGTTTGCGTTTTCAGAGCAAGAGTTAGCCACGCCAATTCCTTCCAGCACCGT
AGGTGCAGAAACGGTGACAGTAACGGCGATGAATAAAGACAGTGGCGCCTCTAAAACGATAGCCGCTGGTAGCGTCAGTG
GTGGTGGCGGTATTCCAGCATTTACCATGACGACCAATTCAGATGGCAGTCAAGATTACTCGATCAATCTACAAATTTTA
GCCTTGATGACCATGTTGGGTTTTTTGCCTGCCATGGTCATTTTGATGACTTCCTTTACACGTATCGTGATTGTGATGTC
GATCTTGCGCCAGGCAATGGGCCTGCAACAAACGCCGTCAAACCAAGTAATTATCGGCATCGCTATTTTTCTCACTTTTT
TCATTATGTCACCAGTCATCAATGCCATTAATGAGCAAGCTGTGCAGCCGTATCTCAATGAGCAGATGACGGCGCGTCAA
GCGTTTGATACGGCTCAAGAGCCACTAAAAGCCTTCATGCTGAAACAGACGCGAGTCAAAGATTTAGAAACCTTTGTTGA
GATATCGGGCTCTGACGCAACCAATCCTGAAGAGGTCTCGATGGCGGTGCTGATCCCTGCGTTCATCACCTCGGAGCTAA
AAACGGCGTTTCAAATCGGCTTTATGCTATTTTTACCCTTTTTAATCATTGATTTAGTGGTGGCGTCTGTTTTGATGGCG
ATGGGTATGATGATGCTTTCGCCGATGATCGTCTCGCTGCCTTTTAAACTCATGCTGTTTGTACTAGTGGATGGATGGAA
CTTGATCCTCTCAACGCTAGCCGGCAGTTTTGCTTTATAG

Protein sequence : 
MLLVALLFTPFAFSEQELATPIPSSTVGAETVTVTAMNKDSGASKTIAAGSVSGGGGIPAFTMTTNSDGSQDYSINLQIL
ALMTMLGFLPAMVILMTSFTRIVIVMSILRQAMGLQQTPSNQVIIGIAIFLTFFIMSPVINAINEQAVQPYLNEQMTARQ
AFDTAQEPLKAFMLKQTRVKDLETFVEISGSDATNPEEVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVASVLMA
MGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 6e-27 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 7e-27 41
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 7e-26 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 4e-27 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 6e-27 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 6e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAA_03446 YP_004565671.1 FliP VFG1259 Protein 3e-62 68
VAA_03446 YP_004565671.1 FliP VFG2016 Protein 8e-60 66
VAA_03446 YP_004565671.1 FliP VFG2494 Protein 1e-52 57
VAA_03446 YP_004565671.1 FliP VFG2338 Protein 3e-47 54