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Name : clpC (WANG_1896) Accession : YP_004563693.1 Strain : Lactobacillus kefiranofaciens ZW3 Genome accession: NC_015602 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2095682 - 2098168 bp Length : 2487 bp Strand : + Note : - DNA sequence : ATGGAAAACTCATATAGTAAAAGCGTAAATCAAGCATTGAAAATCGCACGAGAACAAGCACAAAATTTCCATCATCGCTT AATTGGAACAGAACATGTTTTATTGGCCTTAGTGATTGAAACTGAGGGTAAGGCAGGTAAAATCTTGCGTTCATGGGGGC TAACTCCAACCGCTGTACGTGAAGAAATTGAACGATACACTGGTTATGGCTCTGCCGCTAAGACAAGTTATATGGAAATG TCTCCTCGGTTAAGTTTGGCATTAGATTATGCCAAGAGACAAGCTGATCAAGATGGCTTTAAGGAAATCCAAACCAATCA TGTTTTGTTAGGAATAACAGCTAGTGAACAGGTTTTGTCGGCTATGATTCTTAAGAATCTAAATGTAGACATTAGTCGTT TACGTCAAGATGCGATGGATAGTTTGCAGCAAGAGCAAGATTTTGGCGATTCTGCTAATTGGCTTGGTGGCAATGGTAAT ACTGATGTGAATCAAAAGAAGCAGAAGAACAGTACGACACCAACTTTGGATAAAGTTGCGGTTAATTTGAATCAACGTAG TCGTGAAGGCAACATTGATCCGGTAATTGGTCGTCAGAAGGAAATTAAACGAGTTATTCAGATTTTATCGCGTCGTACTA AAAATAATCCTGTTCTGGTAGGTGAACCTGGTGTTGGTAAGACTGCTGTAGCTGAGGCGATTGCAACTGAGATTGTTAAC AAAAGAGTTCCGGAAGATTTGCTTAATAAGCGAGTTATGGCCTTGAACATGGGTAATTTGGTCGCAGGGACTAAATACCG TGGCGAGTTTGAAGACAGAATGAAGAAAATTCTGGATGAAATTGCCAAAGATGGTAAGGTAATTCTTTTTGTTGACGAAA TGCATACTTTGATTGGCGCTGGTGGCGCTGAAGGAGCAATTGATGCTTCCAATATTTTGAAGCCGTCATTAGCACGTGGT GATATTCAAATGATTGGTGCAACGACCTTTGATGAGTATCAAAAATATATTGAAAAAGATCAAGCTTTAGCACGTCGTTT TCAACAAGTACGCTTAAATGAGCCTTCTAGAAAAGAGGCTCTAGCAATTTTGCAAGGGCTAAAGCCTAAGTATGAAAAAT TCCACTGGGTTACAATTTCTGAGGCTAGTTTGGAAGATGCGGTTGATTTATCTAGTCGCTATATTTCGGATCGCTTTTTA CCAGATAAGGCGATCGATTTGGTTGATGAAGCCAGCGCCGCAGTGAAGATTCGCAACAACGTCGGTTCCGATAATAAGCT GATTCAGATTGATGACAAGATTAAAAAATTGATCACTGAAAAGAATGAAGCCGCAGCTAGTCAGAACTTTGTTAAGGCGG CTGAACTTCAAGACACGCAGAACAATTTGCAAGTACGTCGAGAAAAAATGATTGATAACTTGCATGATAAGGCCAGTGCT AATGCGGTGGTTGAACCAGAAGATATTGCAAAGGTGGTTTCTGATTGGACCGGCGTGCCGGTTACTCAAATGAAGCGTAA TGAGAGTAAGCAATTAGCTAACTTGGAAGGCATTTTACATAAGCGAGTTATCGGTCAGGATAAGGCCGTTTCAGCTGTTG CTCGTGCTATTCGCCGTAGCAGAAGTGGTATTAAGGATGAACGTCGTCCAATTGGTTCATTCCTTTTCTTAGGCTCAACC GGTGTTGGTAAGACTGAGTTAGCTAAATCCGTTGCAGCTACAATGTTTGGCTCAGAAGATAATTTGATCCGACTTGATAT GTCGGAATATATGGATCAAATTGCTTCCAGCAAGTTGATTGGCTCAGCTCCTGGCTACGTTGGTTATGAAGAGGGCGGCC AGTTGTCGGAGCAAGTACGTCGCCATCCATATTCAGTTGTTTTGCTTGATGAAGTAGAAAAAGCTCATCCAGATGTCTTT AACTTACTCTTGCAAGTTCTTGATGAAGGATTTTTAACTGATTCTAAGGGCAGAAAAGTTGATTTTAGAAATACAATTAT TATTATGACTTCTAACTTAGGTTCACGTTCTCTGTTTGATAGCAATGCTGTTGGTTTTAATGCAGACAAAATTGATCAAG CTAAGGCTCGTCAAGCCAAGGTAGAGCAAGCGATCAAGCAATTCTTCCGTCCAGAATTTTTGAACCGAATCGATGAGACA ATTGTCTTTAATGAATTAACCAAAAAGCAATTGCGCGAAATTGTTACTCTGCTTACGCATAAATTGGTGGTACGTTTACA AAAGAAAGGCGTTACGCTTAAGTTATCACGTGCTGCTTTGGATAAAATTGTCAAAGATGGCTATGATCCAGAAAATGGTG CTCGTCCACTTAGAAGGGCTATTCAAAACGATATCGAAGATAAGGTAGCAGAAATGCTGATTACTGGTGAAATTAAAGAT GGTGATACGTTAAAGATCGGCAGTCATCAGGGTCATTTAAAATTTGAAGTAGTTAATGCAAAAAAAGAAGTTGCAAAAGT CAAGTGA Protein sequence : MENSYSKSVNQALKIAREQAQNFHHRLIGTEHVLLALVIETEGKAGKILRSWGLTPTAVREEIERYTGYGSAAKTSYMEM SPRLSLALDYAKRQADQDGFKEIQTNHVLLGITASEQVLSAMILKNLNVDISRLRQDAMDSLQQEQDFGDSANWLGGNGN TDVNQKKQKNSTTPTLDKVAVNLNQRSREGNIDPVIGRQKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAEAIATEIVN KRVPEDLLNKRVMALNMGNLVAGTKYRGEFEDRMKKILDEIAKDGKVILFVDEMHTLIGAGGAEGAIDASNILKPSLARG DIQMIGATTFDEYQKYIEKDQALARRFQQVRLNEPSRKEALAILQGLKPKYEKFHWVTISEASLEDAVDLSSRYISDRFL PDKAIDLVDEASAAVKIRNNVGSDNKLIQIDDKIKKLITEKNEAAASQNFVKAAELQDTQNNLQVRREKMIDNLHDKASA NAVVEPEDIAKVVSDWTGVPVTQMKRNESKQLANLEGILHKRVIGQDKAVSAVARAIRRSRSGIKDERRPIGSFLFLGST GVGKTELAKSVAATMFGSEDNLIRLDMSEYMDQIASSKLIGSAPGYVGYEEGGQLSEQVRRHPYSVVLLDEVEKAHPDVF NLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNLGSRSLFDSNAVGFNADKIDQAKARQAKVEQAIKQFFRPEFLNRIDET IVFNELTKKQLREIVTLLTHKLVVRLQKKGVTLKLSRAALDKIVKDGYDPENGARPLRRAIQNDIEDKVAEMLITGEIKD GDTLKIGSHQGHLKFEVVNAKKEVAKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-168 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004563693.1 | ATPase | VFG0079 | Protein | 0.0 | 52 |
| clpC | YP_004563693.1 | ATPase | VFG0080 | Protein | 4e-140 | 49 |
