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Name : lysS (WANG_1894) Accession : YP_004563691.1 Strain : Lactobacillus kefiranofaciens ZW3 Genome accession: NC_015602 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2093193 - 2094743 bp Length : 1551 bp Strand : + Note : - DNA sequence : TTGGCAAAGAACGAAATGAACGACCAATTACGTGTTCGTCGTCAAAAGATGGACGAAATGCGTGAAAACGGAATCGAACC ATTTGGTCAAAGAAAATTTGATCGTCAAGACTTGGCAAGTACTTTAGAAGAAAAGTACGGCAAGGAAGACAAGGATGAAT TAAACGATGATATGCCTAAGACCAAGATTGCAGGTCGTATGCTTGCAAAACGTGGTAAGGGTAAGGTAGGTTTTGCTGAC CTTTACGACCGTACTGGCAAGATTCAAATTTACGTACGTAAAGACATCGTTGGCGAAGACAATTACAAGATCTTCAAGAA GTCAGATATTGGTGACTTCTTGGGTATCGAAGGTGAAGTTATGAAGACTGATACTGGCGAGCTTACTATCAGAGCTCTCC ACGTAACCTTCTTATCAAAGGCTCTTCGTCCTTTGCCAGATAAGTACCACGGCTTGAAAGACGTTGAAGCGATTTACCGT CAACGTTACCTTGACTTGATCACTAACCGTGAAAGCTACATGCGTTTTGTTCACCGTACTCAAATTATCCAAGCTATTCG TGACTACTTGAATGGTCAAAACTTCTTGGAAGTTGAAACTCCAGTATTGCACAACATTCCCGGTGGTGCTGAAGCTCGTC CATTTATTACTCACCACAACGCTTTGGACATCGATCTTTACATGAGAATCGCTTTGGAATTACCACTTAAGCGTTTGATC GTGGGTGACATGGAACGTGTTTACGAAATTGGTCGTGTATTCAGAAACGAAGGTTTGGATACTCACCACAACCCAGAATT TACTGAACTTGAAAGTTACGCAGCTTACTGGGACTTCCACGATGTAATGAACGAAGCAGAAGGCATTATTCGTGCTGCCG CTAAGGTTGTTATTGATGACGGCAAGGTTACTTACCAAGGTACTGAAATTGACTTAGGCAAGCCATTCCGCCGCGTTCAT ATGGTTGATTTAATCAAGGAAAAGACTGGCGTTGACTTCTGGAAGCCAATGACTCTTGAAGAAGCAACTAAGATTGCCGA AGACCATGATATCCACGTTGAAAAATTCTGGAAGGTTGGTCACATTATCAACGCCTTCTTTGAAAAGTATTGTGAAGAAA CTATCGTTGACCCAACCTTCGTTTACGGTCACCCAGTAGAAATTTCGCCACTTGCTAAGAAGAATGCCGACGATCCAAGA TTTACTGACCGTTTTGAAATTTACATTATGGGTGAAGAATACGGTAACGCCTTCTCAGAATTGAACGATCCTGATGACCA ACGTGCTCGTTTTGAAGCTCAAATGGAAGAACGTGAAGCTGGTAACGACGAAGCCGACATGATCGATGAAGATTACCTTC GCACAATGGAATACGGTATGCCACCTACAGGTGGGTTGGGTATCGGTATTGACCGTTTGGTAATGCTTTTGACTGATGCC CCAGCTATTCGTGATGTCTTGCTCTTCCCAACAATGCGTCCTGAAAAGGTTGAATCAATTGATGCGGAAGTTAAGGCTGA CTTGGCTAAGAAAAATAAAGAAAATAAATAG Protein sequence : MAKNEMNDQLRVRRQKMDEMRENGIEPFGQRKFDRQDLASTLEEKYGKEDKDELNDDMPKTKIAGRMLAKRGKGKVGFAD LYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIEGEVMKTDTGELTIRALHVTFLSKALRPLPDKYHGLKDVEAIYR QRYLDLITNRESYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNALDIDLYMRIALELPLKRLI VGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHDVMNEAEGIIRAAAKVVIDDGKVTYQGTEIDLGKPFRRVH MVDLIKEKTGVDFWKPMTLEEATKIAEDHDIHVEKFWKVGHIINAFFEKYCEETIVDPTFVYGHPVEISPLAKKNADDPR FTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEADMIDEDYLRTMEYGMPPTGGLGIGIDRLVMLLTDA PAIRDVLLFPTMRPEKVESIDAEVKADLAKKNKENK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-110 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004563691.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 3e-110 | 46 |
