Gene Information

Name : troB (ERH_0045)
Accession : YP_004560145.1
Strain : Erysipelothrix rhusiopathiae Fujisawa
Genome accession: NC_015601
Putative virulence/resistance : Virulence
Product : manganese/zinc/iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 48102 - 48842 bp
Length : 741 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGAGAAGGAATATGCAATCGAAGTAGAAGATTTGACGGTTACTTATGACGTTAAACCCGTTTTGTGGGATTGTGA
CGTGAAATTTGAAAAAGGTAAATTGACCGCAATTGTTGGGCCAAATGGTGCCGGTAAATCGACCATGATTAAGGCGATTA
TGGGTCTTTTAAAACCTATTTCAGGGAAAATAACCATTAACGGACAGCATCAAAAAGATGAGTATAAGAATATCGCTTAT
GTACCTCAAAGCGGAAGTGTTGACTGGGATTTTCCAGCAACCGTGGAAGACATCGTTTTGATGGGGCGTTATGGCCACAT
TGGTTGGATTAAACGTCCACGTAAAGAAGACCGTGAGATTGCTAATGAGATGCTCGAACGTGTTGGGATGAGTGCTTATC
GAGATCGACAAATCAGTCAACTCTCTGGTGGTCAACAACAACGTGTTTTCCTTGCTCGTGCATTAACACAACAAGCTGAA
ATTTATATTTTAGATGAACCTCTAAAAGGAGTCGATGTTAAGACAGAAGAAATCTTAATGACACTTCTTAAAGAACTTGC
TGCATCAGGTAAAACAGTTATTGTTGTGCATCACGACCTTACAAGTATTGAAGGATATTTTGATAACATTGCGCTAGTTA
ACGTAAAACTTGTTGCGTGGGGTCCAGTTCAAAATACCTTCACCCAAGAAAACCTAAAACTTACCTACCATACAGATGTA
GGAGGTATTGTAAAATCATGA

Protein sequence : 
MAEKEYAIEVEDLTVTYDVKPVLWDCDVKFEKGKLTAIVGPNGAGKSTMIKAIMGLLKPISGKITINGQHQKDEYKNIAY
VPQSGSVDWDFPATVEDIVLMGRYGHIGWIKRPRKEDREIANEMLERVGMSAYRDRQISQLSGGQQQRVFLARALTQQAE
IYILDEPLKGVDVKTEEILMTLLKELAASGKTVIVVHHDLTSIEGYFDNIALVNVKLVAWGPVQNTFTQENLKLTYHTDV
GGIVKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-52 47
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-52 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-51 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-51 47
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-51 47
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-44 45
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-44 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
troB YP_004560145.1 manganese/zinc/iron ABC transporter ATP-binding protein BAC0400 Protein 9e-64 53
troB YP_004560145.1 manganese/zinc/iron ABC transporter ATP-binding protein BAC0350 Protein 1e-51 47
troB YP_004560145.1 manganese/zinc/iron ABC transporter ATP-binding protein BAC0440 Protein 5e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
troB YP_004560145.1 manganese/zinc/iron ABC transporter ATP-binding protein VFG0526 Protein 1e-51 47