|
Name : lysS (ERH_1597) Accession : YP_004561691.1 Strain : Erysipelothrix rhusiopathiae Fujisawa Genome accession: NC_015601 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1679979 - 1681463 bp Length : 1485 bp Strand : - Note : - DNA sequence : ATGGGACATGAATTAACAGAACAAGAAATTGTTCGTCGTGAGAAAATGGAGGCTTTGCGTGAACAAGGAATCAATCCCTT TGCAAGTGGATTTAAACCCGAAGAACGCTCATCCGACATCGTGGGGGCTTACGATAGCAAATCAAAAGAAGAACTTGCAG AACTTGAAGCTACCACCAAAATAGCTGGTCGTGTTATGACTAAGCGTGTCATGGGTAAAGCTGGATTTATGCATCTTCAA GACCGTGATGGACAAATCCAAGTTTACGTTCGAAAAGATACAGTTGGAGATCTCGCGTTTGAGTATTTTAAAGAACTTGA TTTAGGGGATATTTTAGGTGTTGAAGGAACAATATTCCGTACAAACCATGGTGAATTATCCGTTAAAGCGAGTGAATTGA CACATCTTACAAAAGCATTGCGACCATTACCAGATAAATTTCACGGTTTACAAGATAAAGAAGAACGTTACCGTCGTCGT TATTTAGATTTAATCATGAACGAAGACTCACGACGTACTGCGATGTTGCGTCCACTAATTATGCGTTCCATTCGAAAATT TTTCGATGACCGTGGTTTGGTAGAAGTTGAAACACCTGTTTTAACTCCAATCTTATCCGGTGCGGCAGCGCGTCCTTTTG TAACTCACCATAACACTTTAGATATGGAGTTCTACTTAAGAATTGCGACTGAACTTCCTTTAAAACGCTTGATTGTTGGT GGAATGGAAGGTGTTTATGAAATTGGTCGCTTGTTCCGTAATGAAGGAATGAGTCCAAAACATAACCCGGAATTCACGAC AATCGAAGCTTATGTAGCCTACGCAGATATGTATGACATGATGGATATCAGTGAAGGATTACTTGAATATCTTGCACACG AAGTTTTAGGAACAACCGAAATCGTATATCAAGGTACTGAACTTTCATTAAAAGGTCCTTACCGTCGTGTACATATGGTT GATATCATTAAAGATGTTACTGGAGTTGATTTCTGGAACGTTAAATCTGATGAAGAAGCCGTTGCGATTGCGAAAGAATA TAATATTAATATGGCAAAACACCAGTTATCATTTGGACACGTTGTTAATGAATTCTTTGAGACATTCTGTGAAGAAAAGA TTGTTCAACCAACCTTTGTTTATGGTCACCCTGTTGAAGTGTCACCACTTGCAAAGAAGAATCCAGAAGATCCGCGTTTT ACAGATCGATTTGAGATGTTTATTGATGCACGTGAGTATGCAAATGCATTCTCCGAGCTTAACGATCCTATTGACCAACG CGAACGCTTTGAAAGTCAATTAAGCGAACGTGAACTTGGAAACGAAGAAGCGAATGAAATGGATGTTGATTATGTTGAAG CGTTAGAATACGGAATGCCACCAACAGGTGGAATCGGTATTGGTTTAGACCGTCTCATCATGCTCTTAACAGACAGCGCA AGTATTCGTGATGTCTTGTTATTCCCACATATGAAAAAAAGATAA Protein sequence : MGHELTEQEIVRREKMEALREQGINPFASGFKPEERSSDIVGAYDSKSKEELAELEATTKIAGRVMTKRVMGKAGFMHLQ DRDGQIQVYVRKDTVGDLAFEYFKELDLGDILGVEGTIFRTNHGELSVKASELTHLTKALRPLPDKFHGLQDKEERYRRR YLDLIMNEDSRRTAMLRPLIMRSIRKFFDDRGLVEVETPVLTPILSGAAARPFVTHHNTLDMEFYLRIATELPLKRLIVG GMEGVYEIGRLFRNEGMSPKHNPEFTTIEAYVAYADMYDMMDISEGLLEYLAHEVLGTTEIVYQGTELSLKGPYRRVHMV DIIKDVTGVDFWNVKSDEEAVAIAKEYNINMAKHQLSFGHVVNEFFETFCEEKIVQPTFVYGHPVEVSPLAKKNPEDPRF TDRFEMFIDAREYANAFSELNDPIDQRERFESQLSERELGNEEANEMDVDYVEALEYGMPPTGGIGIGLDRLIMLLTDSA SIRDVLLFPHMKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-108 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004561691.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-108 | 46 |
