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Name : cpsE (SGPB_0813) Accession : YP_004558979.1 Strain : Streptococcus pasteurianus ATCC 43144 Genome accession: NC_015600 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 847674 - 849389 bp Length : 1716 bp Strand : + Note : functional classification: COG1086(M) DNA sequence : ATGATGGGTTTTGCCAGTATTAGTTTAAGTCAGATAATGATTTCCTACCTTGTAGTGATAATTGTTTATCTTGTGTCAGC GAGTAGATTTAAAATTTTTTCAGTTTTAAACCGTTTTACAGACTATAGAGTGTTACTTTATTTAGTTATATCTCTTATTA TTTCTTATAGTTTATTAGTGATCTTTGTGACAGCTGTCTACGGTAGAGAAAATTATAGTTATCGTTTTTTGTTACTTTCT TTCTTGTTTTCTACTTTGTTTGTAATAACACCAAGACTTTTATGGCGTGAGATAAATAGTCATAGTAAAGGGACAAGTAA AGATGGAAAAAAAGTCAGAACATTAGTCGTAGGTGCTGGAAAAGGCGGTTCTATTTTTGTTAAAACTATTTTAAATTCAG ATTCAAACATTGAGATTGTTGGTTTTGTAGATGATGATTCGAATAAGCATGGTAGTTATTTGCATGGTGTCAAAGTGCTG GGAGACCACAAAGCCATTCCCAATTTGGTGTCTGACTATGCTATCGAACAAGTTACAATTGCGATTCCGTCTTTACTAGG GAAGGATCGTGAAAAAATTATTGAGACTTGTAATCAGTGCGGTGTCCGTGTTAACAGTATGCCCAACATAGAGGATGTTA TTGTAGGTAAAGTTTCTACTCAAAATTTACGTGAAATTGACATTGCGGATCTTCTAGGGCGAGAAGAAATCGAATTAAAT CAGACAAATTTAGGAGAATTTTTCCGAGAAAAAACTGTTCTTGTGACTGGAGCAGGTGGATCTATTGGTTCAGAAATTTG TCGTCAAGTTTCAAATTTCAAGCCTAAAAAGTTGTTACTTTTAGGACACGGAGAAAATTCTATTTATTTAATTCATCGAG AACTTCTACAAAAATATGGTCGGGAAATTGAAATTATTCCAATTATTGCAGATATTCAAGATAGAGATTTGATTTTTAAT CTCTTGAAAGACTACCGTCCTAACTATGTTTATCATGCAGCAGCACATAAACATGTGCCATTGATGGAGTATAATCCCAA AGAGGCTGTCAAAAATAATATTTTTGGAACAAAAAATGTCGCTGAAGCAGCATTGGAAGCTGGTGTTGAGAAGTGTGTTA TGATTTCGACAGATAAAGCAGTTAACCCAACAAATGTAATGGGGGCTACCAAACGAGTAGCAGAGACGATTGTGACAGGA CTTAACGGTAAAGGGAAGACAAAATTTGTTGCCGTTCGTTTTGGGAATGTTCTTGGTAGTCGTGGTTCGGTTGTACCTGT CTTTAAAGAGCAGGTTGCAAAAGGTGGCCCGCTAACTGTAACCGATTTCCGTATGACACGTTACTTTATGACAATTCCAG AAGCAAGTCGACTAGTTATTCAAGCGGGCTACCAAGCAAAAGGTGGTGAAGTTTTTGTTCTTGATATGGGCGAACCTGTC AAGATTGTAGACTTAGCTAAAAAAATAATTAAGTTGAGTGGTCATACCGAAGAGGAAATTGGTATTGTTGAGTCTGGCAT TCGTCCAGGAGAAAAGTTATATGAGGAACTTTTATCATCAGATGAACGTGTTAGTGAGCAAGTTCATGAAAAAATCTTTA TTGGAAAAGTCACACCAAAACCGGCTGAGGAAGTCGACAGTTTCATCTCAACTTTATTAAGTACAGACAATAAAACTTTG AAAAATAAACTTATCGAATTTGCAAAACAGGAGTAG Protein sequence : MMGFASISLSQIMISYLVVIIVYLVSASRFKIFSVLNRFTDYRVLLYLVISLIISYSLLVIFVTAVYGRENYSYRFLLLS FLFSTLFVITPRLLWREINSHSKGTSKDGKKVRTLVVGAGKGGSIFVKTILNSDSNIEIVGFVDDDSNKHGSYLHGVKVL GDHKAIPNLVSDYAIEQVTIAIPSLLGKDREKIIETCNQCGVRVNSMPNIEDVIVGKVSTQNLREIDIADLLGREEIELN QTNLGEFFREKTVLVTGAGGSIGSEICRQVSNFKPKKLLLLGHGENSIYLIHRELLQKYGREIEIIPIIADIQDRDLIFN LLKDYRPNYVYHAAAHKHVPLMEYNPKEAVKNNIFGTKNVAEAALEAGVEKCVMISTDKAVNPTNVMGATKRVAETIVTG LNGKGKTKFVAVRFGNVLGSRGSVVPVFKEQVAKGGPLTVTDFRMTRYFMTIPEASRLVIQAGYQAKGGEVFVLDMGEPV KIVDLAKKIIKLSGHTEEEIGIVESGIRPGEKLYEELLSSDERVSEQVHEKIFIGKVTPKPAEEVDSFISTLLSTDNKTL KNKLIEFAKQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-109 | 57 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-106 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cpsE | YP_004558979.1 | polysaccharide biosynthesis protein | VFG1300 | Protein | 3e-108 | 55 |
