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Name : clpC (SGPB_1927) Accession : YP_004560010.1 Strain : Streptococcus pasteurianus ATCC 43144 Genome accession: NC_015600 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1991748 - 1994189 bp Length : 2442 bp Strand : - Note : functional classification: COG0542(O) DNA sequence : ATGAGTGAGTATTCGATAAAAATGCAAGAGGTTTTCAGTGTTGCTCAATACCAAGCAGCGCGTTTTGAAAGCCCATATTT AGAAAGTTGGCACGTCCTTTTAGCTATGGTTGCTATCCATGACTCAGTCGCAGGGCTAACATTTGCGGAATACCAAACTA AAATCGCCTATGAAGAATATGAAGCGGCAGCTGTTTTAGCCATTGGGAAATCACCGTTAACGGACGTTGACAGAGTTCAT TTTGTAGAACAATCTAAAGCTCTTAGTGACGTTTTAGCATTTGCTGAGTCTATTTGTCAGGTGACTGGCGGTAACGAAAT CGGGACAGAACATGTGCTTTATGCGATGTTGTTAAACCTTGATTTATTTGCCACACGTTTGTTAGAAGTTGCTGGTTTTA AAAATAAAGAAGACGGTGACGCTGCTCGTTTGATTGATTTGCGTAAGAGTTTGGCACGTAATGCTGGTTTTACAAAGGAA AATATCAAGGCTATTCATGGGCTTCGTAAGCCGAAAAAAGCGACAATGGGCGGTGCTTTTTCTGAAATGATGAAACCACA GTCAACAGCGGGGGATTTGGTAGATTTCACGCGTGATTTGACAGAGATGGCAGGTCAAGGAAAATTAGAACCTGTTATCG GTCGCGAAAAAGAAATTTCTCGTATGGTGCAGGTACTTAGCCGCAAAACGAAAAACAATCCAGTTTTAGTAGGGGAAGCT GGTGTTGGTAAAACGGCTCTTGCTTACGGTTTGGCACAGCGAATTGTCAATGGTGCGATTCCGTATGAACTCCAAGACAT GCGTGTTCTAGAGCTTGATATGATGAGCGTTGTGGCTGGTACGCGATTCCGTGGTGATTTTGAAGAACGTATGAACCAAA TCATCTCAGATATTGAGGAAGACGGTCATATTATTCTTTTCATTGACGAAGTGCATACGATTATGGGTTCAGGCTCTGGA ATTGACAGCACTTTGGATGCGGCTAATATTCTAAAACCAGCGCTTGCGCGTGGTACGCTTCATATGGTTGGTGCGACAAC GCAAGAAGAATATCAAAAACATCTTGAAAAAGATGCGGCGCTTTCTCGCCGTTTTGCTAAGATTACCATTGAAGAACCAA GTGTTGAAGATGCTTACCAAATCTTGCTTGGGTTAAAGAAATCATATGAAGATTTTCATAATGTGGTGATTTCTGACGAA GCTGTTTTAACGGCTGTCAAAGCTGCGCATCGCTATTTGACAAGTAAAAATCTTCCTGACTCAGCGATTGATTTGCTTGA TGAAGCAAGTGCAACGGTTCAAGGTTTGGTGAAAAAAGAAGCGCCAGCTACTTTGACACCTGCTGATAAAGCTATTTTGG AAGGTGATTTCAAATTGGCAACGAAATTGCTGAAAGAGTCACGCAAGAAGCCAAATCGTAAACCAACTGCTGTGACAGAA GATGATATTATGGCAACGCTCAGTCGTTTGTCAGGTATTCCTGTTGAGAAAATGACACAGGCAGATAGTAAGAAATATTT GAACCTCGAAAAAGAACTCCATAAGCGTGTGATTGGCCAAGATTCAGCTATTTCAGCGATTAGTCGTGCTATTCGTCGTA ATCAAGCGGGCATTCGTACAGGCAAACGTCCGATTGGGTCGTTTATGTTCTTGGGTCCAACGGGTGTTGGTAAAACAGAG TTGGCTAAAGCACTAGCAGAACTGCTATTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTATATGGAAAA ATTTGCGGCGAGTCGTCTTAACGGAGCTCCTCCAGGATATGTCGGTTACGAAGAAGGTGGCGAATTGACTGAAAAAGTTC GCAACAAACCTTATTCTGTGCTTCTATTTGACGAAGTTGAAAAAGCCCACCCAGATATTTTCAATGTGCTTCTCCAAGTG TTGGATGACGGTGTGCTGACGGATAGTCGTGGTCGTAAAGTTGATTTTTCAAACACGATTATCATCATGACATCAAATCT TGGGGCAACCGCTTTGCGTGATGAAAAGACAGTTGGTTTTGGTGCGCGTGATATGGCTCATGATTATGAGGCAATGCAAA AACGTATCATGGAAGAACTCAAAAAAGCTTACCGACCTGAATTCATCAACCGTATTGATGAAAAGGTTGTTTTCCACAAC TTAACTCAAGAAAATATGCGTGATGTCGTGAAAATCATGGTTAAACCATTGATTGCGACACTAGCTGAAAAAGATATTAC GCTAAAATTCCAACCATCAGCATTGAAATATTTAGCCGAAATTGGATACGACCCAGAAATGGGAGCTCGTCCGCTTCGCC GTACTCTGCAAGATAAAGTTGAAGATGAATTATCAGAGCTTATTCTATCAGGCGAATTGGCAAGTGGAAATACCCTTAAA ATCGGCGTTTCTAAAGGGCAACTCAAATTTGATATTGCTTAA Protein sequence : MSEYSIKMQEVFSVAQYQAARFESPYLESWHVLLAMVAIHDSVAGLTFAEYQTKIAYEEYEAAAVLAIGKSPLTDVDRVH FVEQSKALSDVLAFAESICQVTGGNEIGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDAARLIDLRKSLARNAGFTKE NIKAIHGLRKPKKATMGGAFSEMMKPQSTAGDLVDFTRDLTEMAGQGKLEPVIGREKEISRMVQVLSRKTKNNPVLVGEA GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG IDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVVISDE AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPATLTPADKAILEGDFKLATKLLKESRKKPNRKPTAVTE DDIMATLSRLSGIPVEKMTQADSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDEKTVGFGARDMAHDYEAMQKRIMEELKKAYRPEFINRIDEKVVFHN LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEIGYDPEMGARPLRRTLQDKVEDELSELILSGELASGNTLK IGVSKGQLKFDIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-134 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004560010.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 2e-117 | 46 |
| clpC | YP_004560010.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 1e-147 | 45 |
