Gene Information

Name : vicR (SGPB_1449)
Accession : YP_004559570.1
Strain : Streptococcus pasteurianus ATCC 43144
Genome accession: NC_015600
Putative virulence/resistance : Virulence
Product : OmpR family two component system response regulator VicR/WalR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1510099 - 1510809 bp
Length : 711 bp
Strand : -
Note : functional classification: COG0745(T)

DNA sequence :
ATGAAAAAAATTCTTATCGTGGATGATGAAAAACCAATTTCGGATATTATTAAATTTAATTTAGCTAAAGAAGGTTATGA
AACTGTAACGGCTTTTGATGGTCGTGAAGCTATTACAAAGTTTGAGGAAGAAAATCCAGATTTAATTATCCTGGATTTGA
TGTTGCCAGAGTTGGATGGGCTTGAAGTGGCTAAGGAAGTTCGCAAGACAAGTCATATTCCAATCATCATGTTGTCTGCT
AAGGATAGCGAGTTTGATAAAGTTATCGGTCTTGAAATTGGTGCAGATGACTATGTAACCAAACCATTTTCAAATCGTGA
ATTGTTGGCGCGTGTTAAAGCGCACCTTCGTCGTACAGAAAATATTGAAACAGCAGTTGCTGAAGAAAATGCTTCGGCTT
CAAATTCAGAAATCACAATTGGCGACTTAAAAATTTTACCAGATGCCTTTGTAGCACAAAAACGTGGTGAAGATATCGAA
TTAACACACCGTGAGTTTGAATTGCTTCATCATTTGGCAACTCATATGGGACAAGTCATGACTCGTGAATATCTTTTGGA
AACCGTTTGGGGCTATGATTATTTTGGTGATGTGCGTACGGTTGACGTAACGATTCGTCGTTTACGCGAAAAAATTGAAG
ATACACCAAGCCGTCCAGAATATATTTTGACACGTCGGGGTGTTGGGTACTACATGAAGTCATATGAATGA

Protein sequence :
MKKILIVDDEKPISDIIKFNLAKEGYETVTAFDGREAITKFEEENPDLIILDLMLPELDGLEVAKEVRKTSHIPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTENIETAVAEENASASNSEITIGDLKILPDAFVAQKRGEDIE
LTHREFELLHHLATHMGQVMTREYLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKSYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-36 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_012469.1.7685629. Protein 9e-85 78
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR HE999704.1.gene2815. Protein 1e-52 54
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_002952.2859905.p0 Protein 3e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_013450.8614421.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_007793.3914279.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_007622.3794472.p0 Protein 3e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_002745.1124361.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_009782.5559369.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_002951.3237708.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_003923.1003749.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_002758.1121668.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_009641.5332272.p0 Protein 4e-53 53
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_012469.1.7686381. Protein 1e-43 50
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR AE016830.1.gene1681. Protein 1e-45 47
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR FJ349556.1.orf0.gene Protein 2e-39 45
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR HE999704.1.gene1528. Protein 1e-34 44
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR AF155139.2.orf0.gene Protein 2e-38 44
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR AE000516.2.gene3505. Protein 1e-37 44
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR AM180355.1.gene1830. Protein 1e-36 43
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR AF162694.1.orf4.gene Protein 5e-35 42
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR DQ212986.1.gene4.p01 Protein 2e-36 42
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_002952.2859858.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_007622.3794948.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_003923.1003417.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_013450.8614146.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_002951.3238224.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_007793.3914065.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_002758.1121390.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_010079.5776364.p0 Protein 7e-37 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR CP001918.1.gene5135. Protein 3e-24 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_014475.1.orf0.gen Protein 4e-38 41
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR NC_005054.2598277.p0 Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR VFG1389 Protein 9e-32 44
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR VFG1563 Protein 4e-36 42
vicR YP_004559570.1 OmpR family two component system response regulator VicR/WalR VFG1702 Protein 4e-36 41