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Name : lysS (SGPB_1417) Accession : YP_004559540.1 Strain : Streptococcus pasteurianus ATCC 43144 Genome accession: NC_015600 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase, class II Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1481382 - 1482872 bp Length : 1491 bp Strand : + Note : functional classification: COG1190(J) DNA sequence : ATGTCAAACGAACACATTGAAGAATTAAACGACCAACAAATCGTGCGTCGTGAAAAAATGGCAGCTTTGGCTGAACAAGG CATCGATCCTTTCGGAACTCGATTTGAACGCACAGCTACTTCTGGTCAATTAAAAGAAAAATACGCTGACAAAACTAAAG AAGAATTGCATGAAATTAACAAAACAGCTACTATCGCTGGTCGTCTAATGACTAAGCGTGGTAAAGGTAAAGTTGGTTTT GCACACATTCAAGACCGCGACGGTCAAATCCAAGTCTATGTCCGCAAAGATGCTGTCGGTGACGAAAACTATCAAATTTT CAAAAAAGCAGACCTCGGTGACTTCCTCGGTATCGAAGGTGAAATCATGCGTACAGATATGGGGGAATTGACAATCAAAG CCACTCACCTTACTCACTTGTCTAAAGCACTTCGTCCACTCCCAGAAAAATTCCATGGACTTACAGACGTTGAAACTAAA TATCGTAAACGTTACCTTGACTTGGTTTCAAACCGTGAAAGCTTTGAACGCTTCGTTACTCGTTCAAAAATCATCTCAGA AATCCGTCGTTACCTTGACGGACTTGGTTTCTTAGAAGTTGAAACTCCAGTCCTTCACAACGAAGCTGGTGGTGCTGCTG CTCGCCCATTTATCACTCACCACAACGCACAAGATATGGACATGGTTCTTCGTATCGCAACTGAACTTCACTTGAAACGT CTTATCGTTGGTGGTATGGAACGAGTGTACGAAATCGGACGTATCTTCCGTAACGAAGGTATGGATGCCACACACAATCC TGAATTCACATCTATTGAAGTTTACCAAGCCTATGCTGACTTCAAAGATATCATGGATTTGACAGAAGGCATTATCCAAC ACGCTTCAAAAGCTGTTAAAGGTGACGGTCCTATTTCATACCAAGGAACTGAAATTGCCATTGACAAACCATTTAAACGT GTTCACATGGTTGATGCCATTAAAGAAGTCACTGGTGTTGATTTCTGGCAAGAAATGACTCTCGAAGAAGCGCAAGCTAT TGCCAAAGAGAAAAATGTACCAGTTGAAAAACACTTCACTTCAGTTGGTCACATCATCAACGCTTTCTTTGAAGAATTTG TCGAAGAAACATTGATTCAACCAACATTCGTTTATGGACACCCAGTTGAAGTTTCTCCTCTTGCTAAGAAAAACGCAGAA AATCCTCGCTTCACTGACCGTTTCGAACTCTTCATCATGACTAAAGAATACGGTAATGCCTTTACCGAACTTAACGATCC AATCGATCAATTGTCACGTTTTGAAGCCCAAGCAAAAGCTAAAGAACTTGGTGATGACGAAGCAACTGGAATTGACTACG ACTACGTCGAAGCCCTTGAATACGGTATGCCACCAACAGGTGGACTTGGTATCGGTATCGACCGCCTTGTCATGCTCCTC ACAGACACAACAACAATCCGCGACGTCTTACTGTTCCCAACGATGAAGTAA Protein sequence : MSNEHIEELNDQQIVRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTKEELHEINKTATIAGRLMTKRGKGKVGF AHIQDRDGQIQVYVRKDAVGDENYQIFKKADLGDFLGIEGEIMRTDMGELTIKATHLTHLSKALRPLPEKFHGLTDVETK YRKRYLDLVSNRESFERFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQDMDMVLRIATELHLKR LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFKDIMDLTEGIIQHASKAVKGDGPISYQGTEIAIDKPFKR VHMVDAIKEVTGVDFWQEMTLEEAQAIAKEKNVPVEKHFTSVGHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAE NPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLL TDTTTIRDVLLFPTMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-111 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004559540.1 | lysyl-tRNA synthetase, class II | VFG1668 | Protein | 7e-112 | 47 |
