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Name : SGPB_1140 (SGPB_1140) Accession : YP_004559284.1 Strain : Streptococcus pasteurianus ATCC 43144 Genome accession: NC_015600 Putative virulence/resistance : Virulence Product : Tn5252 Orf21 type IV secretion system protein VirD4 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 1190806 - 1192620 bp Length : 1815 bp Strand : - Note : functional classification: COG3505(U) DNA sequence : ATGTATTCCAGACGAAAAGCTTTAGTCTTTGGACTCTTAGGTCTCGCCTTTGGCTATTTCTGCCACCGTCTAACCCTGCT TTATGATAGTTTAACTAATGCCCCACCTATGGAACGTTTTGCCTACCTCTTAGGAGAGGGGTTAAATCAGGTTTTCAATC CTTTATGGCTTTTTACTTTTACTCAAAAGTCTCTTCTTGCCTTTATCCTTGGGCTTCTAACGATGATACTAGTCTATCTT TATGTATCGACAGGCCAGAAGGTCTATCGAGAAGGGGAAGAATACGGTTCTGCACGATTTGGAACTAGTAAGGAAAAGCG GAACTTCTACAGTAAGAATCCTTTCAATGACACGATTTTGGCTCGTGATGTTCGTCTAACCTTGTTGGAAAAGAAGAAGC CACAGTTTGACCGAAATAAAAACTTGATTGTTATTGGGGGCTCTGGGGCAGGTAAGACCTTTCGCTTTGTGAAACCCAAC CTTATCCAGCTTAACTGTTCCAATATTGTCGTAGATCCTAAAGACCATTTGGCCGAGAAGACAGGAAAACTCTTTTTAGA AAACGGTTATCAGGTCAAGGTTTTAGACCTGGTTAATATGACCAATTCAGACGGTTTTAATCCCTTTCGTTATGTAGAAA CAGAGAATGATTTGAACCGCATGTTAACAGTCTATTTTAACAATACCAAGGGAAATGGTTCTCGCAGTGATCCATTTTGG GACGAGGCTTCCATGACATTGGTGAGAGCTATTGCCTCTTATTTGGTGGATTTTTACAATCCTCCAGGAAGTTCCAAGCA AGAGCAGGAAGCAAGACGTAAGCGTGGTCGTTATCCAGCCTTTTCTGAGATTGGTAAACTCATCAAACTCTTATCAAAGG GAGAAAATCAGGACAAAAGTGTACTTGAAGTCCTGTTTGAAGACTATGCTAAGAAATATGGTCACGAGAACTTTACCATG CGAAATTGGGCGGATTTCCAAAATTATAAGGATAAGACGTTGGATTCGGTGATTGCGGTCACAACAGCTAAATTTTCCCT TTTTAATATCCAATCAGTGATTGATTTGACGCAAAGAGACACTATGGATTTGAAAACGTGGGGCACTCAAAAGACCATGG CCTATCTTGTCATTCCAGACAATGATACGACCTTTCGTTTCCTATCTGCTTTATTTTTCTCTACGGTTTTCTCCACTTTG ACCAGACAAGCTGATGTGGACTTTAAAGGGCAACTGCCTATTCATGTTAGAAGCTATCTGGATGAGTTTGCGAATATCGG AGAAATCCCAGACTTTGCTGAACAAACCTCAACAGTTCGCTCTAGGAACATGAGTCTAGTTCCAATCTTGCAAAATATTG CCCAACTCCAAGGACTTTATAAGGAAAAAGAGGCTTGGAAAACTATTCTGGGGAACTGTGACAGTCTCCTCTATTTGGGT GGGAATGACGAGGAAACTTTCAAATTCATGAGTGGTCTTTTAGGAAAACAAACCGTTGATGTCAGAAGCACCAGTTGTTC TTTTGGGCAGACGGGTTCAAGTTCGACCTCTCACCAGAAAATTGCCCGTGACTTGATGACGACTGATGAAGTAGGGAATA TGAAACGAGATGAGTGCCTAGTAAGAATTGCAGGAGTGCCTGTATTTAGATCTAAGAAATATTTTCCACTCAAACATAAG AATTGGAAATGGCTTGCGGATAAGGAAACCGATGAACGCTGGTGGCACTATCACATCAATCCTCTAACCACTGAGGAAGA GCTAGATTTGTCAGGCCAAATAAGGGATTTAAGCATAGAAACGTCACTACATTAA Protein sequence : MYSRRKALVFGLLGLAFGYFCHRLTLLYDSLTNAPPMERFAYLLGEGLNQVFNPLWLFTFTQKSLLAFILGLLTMILVYL YVSTGQKVYREGEEYGSARFGTSKEKRNFYSKNPFNDTILARDVRLTLLEKKKPQFDRNKNLIVIGGSGAGKTFRFVKPN LIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTKGNGSRSDPFW DEASMTLVRAIASYLVDFYNPPGSSKQEQEARRKRGRYPAFSEIGKLIKLLSKGENQDKSVLEVLFEDYAKKYGHENFTM RNWADFQNYKDKTLDSVIAVTTAKFSLFNIQSVIDLTQRDTMDLKTWGTQKTMAYLVIPDNDTTFRFLSALFFSTVFSTL TRQADVDFKGQLPIHVRSYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLG GNDEETFKFMSGLLGKQTVDVRSTSCSFGQTGSSSTSHQKIARDLMTTDEVGNMKRDECLVRIAGVPVFRSKKYFPLKHK NWKWLADKETDERWWHYHINPLTTEEELDLSGQIRDLSIETSLH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0973 | YP_001198339.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 97 |
| SSU98_0987 | YP_001200545.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 97 |
| traG | YP_006309931.1 | TraG/TraD family protein | Not tested | FWisland_1 | Protein | 0.0 | 77 |
