Gene Information

Name : SGPB_1135 (SGPB_1135)
Accession : YP_004559279.1
Strain : Streptococcus pasteurianus ATCC 43144
Genome accession: NC_015600
Putative virulence/resistance : Unknown
Product : Tn5252 Orf28
Function : -
COG functional category : R : General function prediction only
COG ID : COG3942
EC number : -
Position : 1184147 - 1186948 bp
Length : 2802 bp
Strand : -
Note : functional classification: COG3942(R)

DNA sequence :
ATGAAACAGGATAAAAAGGTAGTCAAACAAGCCAGGCAAAACTTTCGAAGCAACTTAAAATCAGCCCGTATGCATTATCG
GAAAGAAGTTAGGACCTTAAAACAGACTGTTCCTAAAAAAGGACGATTTCGAAAACCAGCCCAAAATTCTCTTTTTCGGA
AAAATAAAACAGAGTTAAAAGAAAATCTACTCAGTAGCCAAAAGGAAGCAGAAGAGAAGTTTCTAAAGGAAATTACCTAT
GTGTCTCCTAGACTGTTGAAGGTAAAGGAAATAAAGAAGTATCGACTTCCCCAAGCTCAAGAGCGTTTGCGGACGGCAAG
AAAACATTTGTCAGAAGTGAAACTAAGTGAAAAGTCAAAATCGGTTAATCCTAAGTTTACTTTCAAAAAAGAAAATCCTT
CCTTGAAGTCTCGCTTTCAATTGCACCAAGAAAAATCATTTGATCGACTAAGTGCTGAAAAAGAAGTGAGTTCTGCCAAA
CGTGAGGTCAAACAACTCAAGAAAGTCCAAAAGTCTAAGAAAACCTCCACCAAGTTCAAAGCTGGATTAGGCTTAGCTGC
CTCTGAATCGCTTGACTTGGTGGCACAGGATGATGATTTAGATGGTCTAAGAACCTTAAAGGATACTAGCTTGAAAGCCA
GACGCTATGGCAGGTTTACCTATCAAGCAGGTAAAGTAGCGGTGAAAGGTGGACAGACTGGTTTGCGGTTTACAAAAACG
AAAGTGGCTCATGGAAAGGAGCGATTTCAGAATTTCAAAAAGGGAAAAGGATTCACACGCCAGAAACCTCTTAAACCAAG
AAGACGCTACCAAACCTTTTTAAAGCATGCCAAAAAGCACAGTCTAGCAGGAGTTAAGGGGTTTGTCCAAGCCATTAAGG
GAAGTCTGACCTTCTTTTCTGCAATTGCGGGAAATCCTTTGACTTGGATTGTCTCAGGCATTCTCTTGATACTCCTTTTG
ATGATGAGCTTTTTCATGAGTGTCTCAGGTAGCAGTGTCATTCAACAAGATGAGATGGAGTTGACCAAGGCCTATACCCA
CATGACGTGGGAAGATGCGGAGCATACAAGAACCAACGAAAAAGGGATTACCTACTACACCAAGATTGATGAGGTCATGG
TTTACATGAATCATCAATACCAAGACTACAAGCTTGACGATTTCATGGAAAAAGGTGGTGCGACCTACAAAGCATTTCTC
AGTCAAGTGTGGACATACTTAAACGATGGTGATTCTATTAAATCCATGTCTGACTTGTATAAAGAACCTGCTTACAAGCT
GTCTGATGAGGATCAGGAAGAACTAAAGGAGTTGACCGAAGAAGGCAACTACCTAGCCCTTCAAGAGTTGGACAATCCCT
TTCAGGGACAGACAGATGAGGATAGCTTAAACATGACCTACAGATATGGATATGAGGTCATTGATGAGAAACCAACACTT
CATCATCATATCATCTTAGAAGCAATAGAAGGCCAAGTCATTGTGGCTCCGATGGATGGCAAGGTATCTCTTGATGGAAA
GAACATTGTTTTGACATCTGGTAAGGGAGTGAATAAGACCAAACTAACCTTGTTAGGCATTCATTCAGGTCGTGTGAGTG
AAAATCAACAAGTCTTGGCAGGAGATATTATTGGTCAGACCAAAGACGGAACGGGTCTAAAAGTCACCTATCAAAAGGTT
GATGATGACACGGATAAGTTGGTCTATGTCAATCCAGCTTTCTACTTTCCAAAAGTGATTCAGGTTCAGACCACCATTCT
TCCAACTATTGGTCAGTTTGGTGGCGACGAGTTCGAGAGAGCAAAGGCGATATATGACTATCTCAAAAGCAAAGGTGCGA
CTAATCAAGCTATCGCAGCCATTTTAGGAAATTGGTCGGTAGAATCCTCTATTAATCCCAAGCGTGCGGAGGGTGACTAT
CTATCTCCCCCTATTGGTGCTACAGACAGTTCGTGGGATGATGAGGGCTGGCTTTCACTCAATGGTCCAACTATATACAA
TGGACGTTACCCAAATATTCTTAAACGTGGTTTAGGCTTAGGACAATGGACAGATACTGCAGATGGTTCACGCAGACATA
CCTTATTGCTCGAATATGCCAAAGGAAAACATCAAAAATGGTATGACTTAGGGTTACAACTGGATTTCATGTTGCATGGG
GATAGTCCTTATTACACCAACTGGTTAAAGGACTTCTTCAAAAATTCAGGAAGTCCAGCTAGTCTTGCCCAACTATTTCT
CATTTACTGGGAAGGAAATAGTGGTGATAAGCTGCTTGAACGACAGACACGAGCCAGTGAGTGGTATTACCAAATCGAAA
AAGGCTTTAGTCAACCCAACGGTGGGAGAGCACAAAGTGATCCAAAAGCACTTGAAGCTGTACGAGGAGACCTTTTTGAA
AGCTCTGTTCCAGGAGGTGGTGACGGTATGGGCTATGCTTACGGCCAATGTACTTGGGGAGTCGCAGCCCGTATCAACCA
ACTGGGTCTAAAACTCAAAGGTAAAAATGGTGAGAAGATTCCACTTATCAGTGCCATGGGCAATGGCCAGGATTGGGTGC
GTACAGCCGCAAGTCTCGGTGGTGAAACTGGAACAAGTCCGCAAGCAGGAGCCATACTCTCATTTGCGGGTGGAGGACAT
GGAACCCCAGGTGGATACGGGCATGTGGCTTTCGTAGAGAAAGTTTACCCAGATGGCTCATTCCTTATCTCAGAGACCAA
TGTGAATGGCAATCCCAACTACACCTTCCGTAAATTATCTGGAGTGGATAGTGGCTTGAGTTTTGCCTATACAACGAAAT
AA

Protein sequence :
MKQDKKVVKQARQNFRSNLKSARMHYRKEVRTLKQTVPKKGRFRKPAQNSLFRKNKTELKENLLSSQKEAEEKFLKEITY
VSPRLLKVKEIKKYRLPQAQERLRTARKHLSEVKLSEKSKSVNPKFTFKKENPSLKSRFQLHQEKSFDRLSAEKEVSSAK
REVKQLKKVQKSKKTSTKFKAGLGLAASESLDLVAQDDDLDGLRTLKDTSLKARRYGRFTYQAGKVAVKGGQTGLRFTKT
KVAHGKERFQNFKKGKGFTRQKPLKPRRRYQTFLKHAKKHSLAGVKGFVQAIKGSLTFFSAIAGNPLTWIVSGILLILLL
MMSFFMSVSGSSVIQQDEMELTKAYTHMTWEDAEHTRTNEKGITYYTKIDEVMVYMNHQYQDYKLDDFMEKGGATYKAFL
SQVWTYLNDGDSIKSMSDLYKEPAYKLSDEDQEELKELTEEGNYLALQELDNPFQGQTDEDSLNMTYRYGYEVIDEKPTL
HHHIILEAIEGQVIVAPMDGKVSLDGKNIVLTSGKGVNKTKLTLLGIHSGRVSENQQVLAGDIIGQTKDGTGLKVTYQKV
DDDTDKLVYVNPAFYFPKVIQVQTTILPTIGQFGGDEFERAKAIYDYLKSKGATNQAIAAILGNWSVESSINPKRAEGDY
LSPPIGATDSSWDDEGWLSLNGPTIYNGRYPNILKRGLGLGQWTDTADGSRRHTLLLEYAKGKHQKWYDLGLQLDFMLHG
DSPYYTNWLKDFFKNSGSPASLAQLFLIYWEGNSGDKLLERQTRASEWYYQIEKGFSQPNGGRAQSDPKALEAVRGDLFE
SSVPGGGDGMGYAYGQCTWGVAARINQLGLKLKGKNGEKIPLISAMGNGQDWVRTAASLGGETGTSPQAGAILSFAGGGH
GTPGGYGHVAFVEKVYPDGSFLISETNVNGNPNYTFRKLSGVDSGLSFAYTTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0968 YP_001198334.1 Tn5252, Orf28 Not tested 89K Protein 0.0 93
SSU98_0981 YP_001200539.1 Tn5252, Orf28 Not tested 89K Protein 0.0 93
Spaf_1124 YP_006309926.1 putative conjugal transfer protein Not tested FWisland_1 Protein 0.0 60