Gene Information

Name : SGPB_1112 (SGPB_1112)
Accession : YP_004559257.1
Strain : Streptococcus pasteurianus ATCC 43144
Genome accession: NC_015600
Putative virulence/resistance : Unknown
Product : Tn5252 ORF4 relaxase
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3843
EC number : -
Position : 1154442 - 1156316 bp
Length : 1875 bp
Strand : -
Note : -

DNA sequence :
ATGGTAGTCACTAAGCATTTTGCGGTTCATGGCAACAAATACCGTAAAAGTCTTATCAAGTATATTCTAAATCCAGCTAA
GACTGACCAACTCAAATTGGTTTCAGATTTTGGAATGAGCAATTACCTCGACTTCCCTAATTATGAAGAAATAGTTGAGA
TGTATCAGGCAAACTTAGTCAATAATGATAGGCTTTATGATTCGAGAAATGACCGGCAACAAATCAAGCAAAATAAAATT
CATGCTCATCATCTTATCCAGTCATTCTCACCTGAGGATAATCTTACACCTGAAGAAATCAATCGTATTGGTTATGAGAC
GATAAAGGAGTTGACTGGCGGAAACTTTCGCTTTATTGTGACAACCCATACGGATAGGTCGCATGTTCATAACCATATCC
TCATCAATTCTGTTGACCTCAATTCTCATAAGAAACTCAAATGGGATTATGCTCAGGAGAGAAATTTACGGATGATTTCT
GACCGTCTTTCCAAAGAAGCAGGTGCCAAAATTATCACACCGAACCGTTATTCTCATGAGAAGTTTGTGACCTATCGCAA
AAGTAATCACAAATTTGAATTGAAGCAACGTCTTTATTTTCTGATGGAGAATAGTAAGGATTTGGACGACTTTTTATCCA
AGGCAGAAGCATTGAATGTTCAGATTGATTTTTCAAGAAAATACGCGCGTTTTTTGATGACGGATATGCCTATGAAGCGA
GTTATTAGAGGCAAGCAACTAGATAAACGTCAACCCTATACCGAGGAATACTTTCGAGAGCACTTTGCCAAGCGAGCGAT
TGAGCAATGTTTAGATTTTCTCTTACCCAGAGTTCGTGACCTTTCACAACTTTTGGAGTTTGCAAGAGAACTCAACCTTG
CTATGTCTCTAAAACAAAAGAATGTGGCGTTTACTCTAACAAAAAATAGTCAGAGCATTACAGTCAATAATCAAAAAGTC
AGTTCCAAAAATCTCTACGATGTTCAATTTTTCGAGACTTACTTTGAGAAACGTGGAGAAGTTCCTGATATTGACCAGTC
GCAACTTATTTCCGACTTTGAGGGATATTGTGAGGAACAAGATAAGGAAAAGCTAGCTTATGAAGACTTGCAAGAGGCTT
ATCAGGCATTTAAGGAGAAACGAGACCAGGCTCAAGAGTTTGAGGTCGTCTTAGCTGACCATCAGATTGATAAGTTAGTC
AAAGATGGTCTCTTTATCAGAATGAATTACGGCGTTAAAAAAGATGGCTTGGTCTTTATCCCAAACCGTCATTTAGATAT
TAAAGAGACAGAGAGTGGTAAACACTACCATGCCTTTATCCGTGAGACCGCACAATTTTTCATTTACAATAAGGAGGCGT
CCGAACTCAATCGCTATATGCGAGGGCGTGAACTCATTCGTCAGTTAACCAATGATAGCCAGACTATCTCTAAAAGAAAA
AGACCGACCATTGATACACTTAAGAAAAAGATTGAAGAGATTAATCTTCTTATTGAGTTGGGTACGGAGAATAAGTCTTA
TCAAGATATTAAAGACGAGATTATTAAGGATATTGCTCAATTAGATTTGACCATTACAGAGATTCAGGAACACATAGATC
ATCTCAACAAGGTTGCGGAAGTCTTGCTTAACCTGGACAATAACGATATAGAGAACCGCCGCTTGGCCAAATATGACTAT
GCCAAGATGAATCTAACTGCGGCTATAAAACTGGAACAAGTTGAGAAAGAAATCGAAATCTATCAAATTAAGTTAGATAA
GTCAATAGATGATTATGAGTATTTAATAAGGAGGTTGGAAAAGTTTGTCAAAATTTTAAATGAAATAGACTCAAGCAAGG
ATGAACTAAAATTTGAACACAGTGAAAAAATGTGA

Protein sequence :
MVVTKHFAVHGNKYRKSLIKYILNPAKTDQLKLVSDFGMSNYLDFPNYEEIVEMYQANLVNNDRLYDSRNDRQQIKQNKI
HAHHLIQSFSPEDNLTPEEINRIGYETIKELTGGNFRFIVTTHTDRSHVHNHILINSVDLNSHKKLKWDYAQERNLRMIS
DRLSKEAGAKIITPNRYSHEKFVTYRKSNHKFELKQRLYFLMENSKDLDDFLSKAEALNVQIDFSRKYARFLMTDMPMKR
VIRGKQLDKRQPYTEEYFREHFAKRAIEQCLDFLLPRVRDLSQLLEFARELNLAMSLKQKNVAFTLTKNSQSITVNNQKV
SSKNLYDVQFFETYFEKRGEVPDIDQSQLISDFEGYCEEQDKEKLAYEDLQEAYQAFKEKRDQAQEFEVVLADHQIDKLV
KDGLFIRMNYGVKKDGLVFIPNRHLDIKETESGKHYHAFIRETAQFFIYNKEASELNRYMRGRELIRQLTNDSQTISKRK
RPTIDTLKKKIEEINLLIELGTENKSYQDIKDEIIKDIAQLDLTITEIQEHIDHLNKVAEVLLNLDNNDIENRRLAKYDY
AKMNLTAAIKLEQVEKEIEIYQIKLDKSIDDYEYLIRRLEKFVKILNEIDSSKDELKFEHSEKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0919 YP_001200477.1 chromosome segregation ATPase Not tested 89K Protein 0.0 62
SSU05_0913 YP_001198279.1 chromosome segregation ATPase Not tested 89K Protein 0.0 62
Spaf_1098 YP_006309900.1 relaxase Not tested FWisland_1 Protein 0.0 58
SP_1056 NP_345530.1 Tn5252, relaxase Not tested PPI-1 Protein 1e-154 51