Gene Information

Name : Sinme_6715 (Sinme_6715)
Accession : YP_004557836.1
Strain :
Genome accession: NC_015597
Putative virulence/resistance : Virulence
Product : glutamine synthetase type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 99219 - 100763 bp
Length : 1545 bp
Strand : -
Note : TIGRFAM: Glutamine synthetase type I; KEGG: mch:Mchl_2654 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp

DNA sequence :
GTGATCATTCCGGGACCACGGACGCAATCGGCAACAATTGGGAGGCTCTATCGGAATCGGCAATACGTGTCCGGTGCATT
GCTGAACGCGTTACCTGACACGGGCAATTTCCTGATGGCACAAGAGGGACAGCAAAGCATGTTGACTTCCGAGGATGTGC
TCACGGTGATCAAAGACACCGACGCCGAATACGTTGACTTCCGTTACACCGACCCGTGCGGCAAGTGGCATCATATGACC
CTCCACGTTTCCATCGTCGACAATGAGGCGTTCGCCGACGGTATCATGTTCGACGCCTCTTCCATCGCCGGCTGGAAAGC
GATCAACGAGTCCGACATGACGCTTATACCCGATCCGACGACCGCCCAGTTTGACTCAATCATGAAGTCCACCCTGATGG
TCAACTGCGACATTCGTGAGCCGACGACGGGTGAACCCTACAACCGCGATCCGCGTGGCATTGCCAAGAAAGCCGAGGCA
TACCTGAAGTCCACAGGAATCGCTGACACCGTCAATGTTGGCCCCGAGCCGGAGTTCTTCATGTTCGACTACGTGGAGTT
CACGGACGACCCCTGCAACACCGGTTTCGAGATCAGTTCCTCTGAACTGCCGATCAACGGCTATACGCTCTACAGAGGCG
GCAACCTAGGTCACCACATCCAGAGCAGGGCCGGCTACGCCCCGGTTCCGCCGCTGGATTCTGCTCACGACATTCGCGGC
GAGATGCTAGAGGCCGTGAAGGCTATGGGTGTGACGGTCGAGAAGCACCACCATGAGGTTGCCCCCGCCCAGCATGAGCT
CGGCATTAAGTTCAATACCTTGGTTCGCGCCGCAGACGCGGTGCAGATATACAAGTATTGTGTTCGCAACGTTGCTCAAT
CCAAGGGTAAAACGGCGACCTTCATGCCGAAGCCTTTCCATTGCAAAAACGGCTCGGGCATGCACGTGAACCAGTCGCTG
TGGAAGGGCGGCAATCCTCTCTTCGCTGGTAAGGAGCATGCCGGCCTGTCCCAGGAGGCCCTATGGTACATCGGCGGCAT
CAACAAGCACGCCAGGGCACTCAACGCCTTCACCAACCCGACGACGAACTCCTACAAGCGTCTCGTCCCGGGATACGAGG
CGCCGGTTTTCCTGACCTATTCGGCCCGCAACCGCTCTGCCTCCTGCCGTATTCCGTGGACGACCTCCCCAAAGGCCAAG
CGCATCGAGGTCCGCTTCCCTGATCCGACCGCCAATCCCTACCTCGCCTTTTCGGCGATTCTGATGGCCGGTCTCGATGG
CATCCTGAACAAGATCGAGCCAGGCCAAGCGATGGATAAAGATCTCTACGAACTACCCCGGTGCGAGCAGCAGAAGATCC
CGACCCTCTGCTGCTCTCTGCGCGAAGCTCTTGAAAGCCTTGACAAGGACCGGGCGTTTCTCAAGGCCGGCGGCGTCTTC
GACGACGACTTCATCGACAGCTACATCAAGCTGAAGATGGAGGAGGTCATTCGGATTGAGATGACCCCGCACCCGGTCGA
ATTCCAAATGTACTACTCCTCCTAA

Protein sequence :
MIIPGPRTQSATIGRLYRNRQYVSGALLNALPDTGNFLMAQEGQQSMLTSEDVLTVIKDTDAEYVDFRYTDPCGKWHHMT
LHVSIVDNEAFADGIMFDASSIAGWKAINESDMTLIPDPTTAQFDSIMKSTLMVNCDIREPTTGEPYNRDPRGIAKKAEA
YLKSTGIADTVNVGPEPEFFMFDYVEFTDDPCNTGFEISSSELPINGYTLYRGGNLGHHIQSRAGYAPVPPLDSAHDIRG
EMLEAVKAMGVTVEKHHHEVAPAQHELGIKFNTLVRAADAVQIYKYCVRNVAQSKGKTATFMPKPFHCKNGSGMHVNQSL
WKGGNPLFAGKEHAGLSQEALWYIGGINKHARALNAFTNPTTNSYKRLVPGYEAPVFLTYSARNRSASCRIPWTTSPKAK
RIEVRFPDPTANPYLAFSAILMAGLDGILNKIEPGQAMDKDLYELPRCEQQKIPTLCCSLREALESLDKDRAFLKAGGVF
DDDFIDSYIKLKMEEVIRIEMTPHPVEFQMYYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-92 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_6715 YP_004557836.1 glutamine synthetase type I VFG1399 Protein 8e-96 49