Gene Information

Name : Sinme_4111 (Sinme_4111)
Accession : YP_004556684.1
Strain :
Genome accession: NC_015596
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 425790 - 426590 bp
Length : 801 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: smd:Smed_4079 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACGCTTTCGGCGAGCGGGGTTTCATGGTCGGCCGGTGGGGTGGAGATCCTGAAGGATGTCTCCCTCACCGTCGAGAC
GGGAGAGTTCCTCGGCATCATCGGCCCGAACGGTTCCGGCAAGACGAGCCTGATGTCGCTCATATCGGGCATCCGCAAGC
CGAAGAGGGGGGAGGTGCTTCTGGACGGTTGTCCGATCGGGACGCTCGGCCGCCGCACGGTCGCGCAAAGGCTCGCTCTG
GTCGAGCAGCAGGCCGAGACCGGCGAGCGGATCACCGCGCGCCAAGCGGTCGAGCTCGGCCGCACGCCCTATCTCGGGCC
GCTTTCGCCCTGGTCGCCGGAGGACGATGCGATCGTCGGGGCGGCGCTCGCAAATGTGGACATGGCGCATCTTGCCGATC
GCCTCTGGCACACGCTCTCCGGCGGCGAGCGGCAAAGGCTGCACATTGCTCGGGCGCTGGCGCAGCAATCGAAGATCCTG
CTCCTCGACGAGCCGACCAACCATCTCGACATCGGCCATCAGATCAGCCTGCTCGACCTCGTTCGCCGCCAGGACCTGAC
GGTGGTCGCAGCGCTCCATGACCTCAACCACGCCGCTATGTTCTGCGACAGGATCGCGGTGATGCAGGCCGGCCGGCTGG
TGGCGCTCGGGCGCCCGCGGGAGGTACTGACGGTCGAGCGCATCCGCGCAGTCTTCGGGATCGAGGTCGAGGTCGAGCAC
GAGTTCGACGGAAGCTGCTCCATCCGCTATCGCGCAAGACGACCGCGTCCGCTTGCCGCAATCGCCGCCGTCGGAGCCTG
A

Protein sequence : 
MTLSASGVSWSAGGVEILKDVSLTVETGEFLGIIGPNGSGKTSLMSLISGIRKPKRGEVLLDGCPIGTLGRRTVAQRLAL
VEQQAETGERITARQAVELGRTPYLGPLSPWSPEDDAIVGAALANVDMAHLADRLWHTLSGGERQRLHIARALAQQSKIL
LLDEPTNHLDIGHQISLLDLVRRQDLTVVAALHDLNHAAMFCDRIAVMQAGRLVALGRPREVLTVERIRAVFGIEVEVEH
EFDGSCSIRYRARRPRPLAAIAAVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-38 45
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-37 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-31 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-31 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-31 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_4111 YP_004556684.1 iron-chelate-transporting ATPase BAC0164 Protein 3e-38 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_4111 YP_004556684.1 iron-chelate-transporting ATPase VFG1042 Protein 2e-38 45
Sinme_4111 YP_004556684.1 iron-chelate-transporting ATPase VFG0925 Protein 3e-34 41