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Name : Sinme_3972 (Sinme_3972) Accession : YP_004556552.1 Strain : Genome accession: NC_015596 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 286247 - 288331 bp Length : 2085 bp Strand : + Note : SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: smd:Smed_3922 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal DNA sequence : ATGAATGTTTCGCAGCAGATCGGACCGCGCGCCGCCGCCTCGGAGCGCAGCATGGCCGATGCCATCCGGTTTCTTTCCAT GGATGCCGTCGAGAAGGCCAATTCCGGTCACCCCGGCATGCCGATGGGCATGGCCGACGCGGTGACGGTCCTCTTCAACC GCTTCATCAGGATCGATCCGTCACACCCCGACTGGCCGGACCGCGACCGTTTCGTGCTTTCGGCCGGCCATGGCTCGATG CTGCTCTATTCGCTCCATCACCTCATCGGCTTCGCCGATATGCCGATGGCCGAGCTTTCATCCTTTCGCCAGCTTGGCTC GAAAACGGCCGGCCACCCCGAATATGGCCATGCCCTCGGTATCGAGACCACCACCGGCCCGCTCGGCCAGGGGATCTCGA CCGCTGTCGGCATGGCGATCGCCGAACAGATGATGGCCGCCCGCTTCGGCAGTGCGCTCTGCAACCACTTCACTTACGTG GTAGCCGGAGACGGCTGCCTGCAGGAGGGGATCAGCCACGAGGCGATCGACCTTGCCGGACATTTGAAATTGCGCAAGCT CGTCGTGCTGTGGGACGACAACCGGATATCGATCGACGGCTCGACCGATCTCTCCACCTCGATGAACCAGCTTGCGCGTT TCCGCGCCGCCGGCTGGGACGCGCAAGCAGTCGACGGCCACGACCCCGACGCGGCGGCAAAAGCGATCGAACGGGCGCGC CGGACCCGAAAGCCGTCGCTGATCGCCTGCCGCACCCGTATCGGCAAGGGTGCCGCCAGCATGGAGGGCTCGCACAAGAC CCACGGCGCGGCGCTCGGCGAAAAGGAGATCGCTGCCACACGCGAAAAACTCGGCTGGCCGCATCCGCCCTTCTTCGTTC CGCCCGAGATCAAGGCCGCCTGGGAAAAGGTGGCGACGCGGGGCCGCACGGCCCGCGAGGCGTGGGAAATCCGCCTTGAC GCTTCGCGCTCGAAAAAGCGCTACGAGCAGACCGTAGAACGGCAGCTCGACGGCGAGGTCGGCGATCTGCTTGCAAGATT CCGGGGCGCGCATCGCACAAGGGCTACGAAGGTCGCGACGCGTCAGGCCTCGCAGATGGCTCTGGAGGTCATCAACGGCG CCACCGCTTTGACCATCGGCGGCTCGGCCGACCTGACCGGCTCGAACCTGACGCTGACCTCGCAGACCCAGCCCATCTCG CCGGGTAATTTCAAGGGCCGCTACCTGCATTACGGCATCCGCGAGCACGGCATGGCGGCCGCCATGAACGGCATCGCGCT CCATGGCGGCTTCATCCCCTATGGGGGCACTTTCCTGGTCTTTTCCGACTATGCCCGCGGTGCGATGCGCCTTTCGGCCC TGATGGGCCTGCCGGTCATCTATGTGCTGACCCATGATTCCATCGGGCTCGGCGAAGACGGACCGACGCACCAGCCGGTC GAGCATCTGGCCATGCTGCGCGCCACGCCCAACCTCAACGTCTTCCGGCCGGCCGACATCATCGAGACGGCGGAATGCTG GGAGATCGCGATTGGCGAGAAGAACACGCCGAGCGTCCTCGCCCTTTCGCGGCAGGCCCTGCCGATGCTGCGCCGGACGG ACGGGAACGAGAACCTGTCGGCGCTCGGGGCCTATGTCCTGAGGGAGGCGCGCGGCGACCGGGACATCACGCTTCTCGCC ACGGGATCCGAAGTCGAGATCGCCGTTGCCGCAGCGGAGCGCCTGCAGGCCGAAGAACGCATAGCAGCGGCGGTGGTCTC CATGCCGTGCTGGGAGAAGTTCGAGGCTCAGGACGCGGCCTATCAAAGGCAGGTCCTCGGAGATGCACCGCGCATCGCCA TCGAGGCGGCGGGCCGCCTCGGCTGGGACCGTTGGATGGGCCCCGACAGTGCTTTCGTCGGGATGACAGGCTTCGGTGCC TCGGCACCGGCCGGAGACCTCTACCGCCATTTCGGCATTACCGCCGACCATGTCGTCGCAGAAGCCCTGGAGCTTCTCCG CCGGGCATGCCCGGAAACGCCGCCCATAGGTGCCCGGACCGGCAAACCGGTCGCCCACATCGTCAGATCATCCGAGGAGG CATGA Protein sequence : MNVSQQIGPRAAASERSMADAIRFLSMDAVEKANSGHPGMPMGMADAVTVLFNRFIRIDPSHPDWPDRDRFVLSAGHGSM LLYSLHHLIGFADMPMAELSSFRQLGSKTAGHPEYGHALGIETTTGPLGQGISTAVGMAIAEQMMAARFGSALCNHFTYV VAGDGCLQEGISHEAIDLAGHLKLRKLVVLWDDNRISIDGSTDLSTSMNQLARFRAAGWDAQAVDGHDPDAAAKAIERAR RTRKPSLIACRTRIGKGAASMEGSHKTHGAALGEKEIAATREKLGWPHPPFFVPPEIKAAWEKVATRGRTAREAWEIRLD ASRSKKRYEQTVERQLDGEVGDLLARFRGAHRTRATKVATRQASQMALEVINGATALTIGGSADLTGSNLTLTSQTQPIS PGNFKGRYLHYGIREHGMAAAMNGIALHGGFIPYGGTFLVFSDYARGAMRLSALMGLPVIYVLTHDSIGLGEDGPTHQPV EHLAMLRATPNLNVFRPADIIETAECWEIAIGEKNTPSVLALSRQALPMLRRTDGNENLSALGAYVLREARGDRDITLLA TGSEVEIAVAAAERLQAEERIAAAVVSMPCWEKFEAQDAAYQRQVLGDAPRIAIEAAGRLGWDRWMGPDSAFVGMTGFGA SAPAGDLYRHFGITADHVVAEALELLRRACPETPPIGARTGKPVAHIVRSSEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-145 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 9e-143 | 49 |
