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Name : Sinme_3877 (Sinme_3877) Accession : YP_004556458.1 Strain : Genome accession: NC_015596 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctP Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1638 EC number : - Position : 193778 - 194749 bp Length : 972 bp Strand : - Note : KEGG: smd:Smed_3836 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria DNA sequence : ATGAAAACGGGAATGATTTCGCTCGCGCTTGCGGGGCTGCTGATGGCGTCGCAAGCCATGGCTCAAGAGGCGCGCACATT GCGCCTGGGAATGCAGGGTACGGCCGGAGACCCGCAATTCGAGGGCGTCACCGAGGCCGCGCGCATCATCAAGGAAAAAT CGGGCGGCCGGCTGACGCTGGAAATCTTCCCGAATTCTCAGCTCGGTACATTCACCGAGATGATGGAGCAGGTGACGCTC GGCGAGCTCGACTTCACGCTGAACCCGTTTGGCGGGATGGACGCCTGGGTTCCCCGGGCGGTCTTGGCGAGCACCGCCTA TGTCGTCGGCGACTTCGATCACCTTCAGAAGATCATCGCCTCCGACTGGGGTAAGGGGATCGTCGACGAGATGCGGGCCG AGCACAAGTGGCGCATGGTCGACTCCTGGTACTTCGGGACGCGGCACACGACGGCAAAGAAACCGATCGAAAAGCCTGCC GATTTCGCGGGCATGAAGCTGCGCGTCCCGAACTCGGCGCCGCTTCTTACCTGGGCGAAGGCGATGGGCGCGAGCCCCAC GCCGGTCGCATTCGCCGAAGTCTATCTGGCACTCCAGACCAATCAGGTGGACGGCCAGGAAAACCCGCTGCCCATCATCG ACTCGATGAAGTTCACCGAGGTCCAGTCCCATGTCTCCCTGACTGGGCATCTGGTGCAGGACCAGGTCATCCTTATGTCG GAAGACACGTGGAATGCGCTCGAGCCCGCCGACCAGAAGGTCGTGATGGAGGCATTCGAGGCGGGCGGCACCCTCAACGA CAAGTTGGTCACCGACAAGGAAGCCAGCCTCGTCAGCGATTTTCGCGAGCGCGGCATCACCGTGGTCGAGCCCGACAAGG CGGCGTTCCAGGAAGCGATGAAGCCCGTCTATGCCGATCTCGACGCAAAATTCGGTGCCGACACGGTGAAGACGCTGCTC GATCTCCGTTAA Protein sequence : MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTLEIFPNSQLGTFTEMMEQVTL GELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIASDWGKGIVDEMRAEHKWRMVDSWYFGTRHTTAKKPIEKPA DFAGMKLRVPNSAPLLTWAKAMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS EDTWNALEPADQKVVMEAFEAGGTLNDKLVTDKEASLVSDFRERGITVVEPDKAAFQEAMKPVYADLDAKFGADTVKTLL DLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1779 | NP_231414.1 | C4-dicarboxylate-binding protein | Not tested | VPI-2 | Protein | 9e-67 | 45 |
| dctP-1 | YP_001217320.1 | C4-dicarboxylate-binding periplasmic protein | Not tested | VPI-2 | Protein | 9e-67 | 45 |
| VPI2_0027c | ACA01844.1 | C4-dicarboxylate-binding periplasmic protein | Not tested | VPI-2 | Protein | 8e-67 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sinme_3877 | YP_004556458.1 | TRAP dicarboxylate transporter subunit DctP | VFG1112 | Protein | 4e-67 | 45 |
