Gene Information

Name : Sinme_5101 (Sinme_5101)
Accession : YP_004557625.1
Strain :
Genome accession: NC_015596
Putative virulence/resistance : Unknown
Product : IS66 Orf2 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1500250 - 1500606 bp
Length : 357 bp
Strand : -
Note : PFAM: Transposase (putative), IS66 Orf2-like; KEGG: smd:Smed_6365 IS66 Orf2 family protein

DNA sequence :
GTGATCGGAGTTTCGCCGAATGGCGTGAAGATCATGGTGGCGACGCAGCCTGTCGACTTCCGGCGCGGAATGAATGGCCT
GGTGGCTTTGGTGGCATCAGCGCTTGCGGCCGATCCCTATTGTGGCGACGTGTTCGTGTTCCGGGCCAAGCGTCTCGATC
GACTTCGCTGCATTTACTGGGACGGATCAGGCATGATCCTGGTGACGAAATGGCTGGAGGCGGGCAAGTTCGTTTGGCCA
CCGATCCGCGATGGCGCGATGCAGATGAGTAGCCAGGAGTTCTCGCTTTTGTTGGCCGGTATCGACTGGACGCGGGTCAA
ACGAAACGCGGTAAAGCGACCGACGAAAGCAGGCTGA

Protein sequence :
MIGVSPNGVKIMVATQPVDFRRGMNGLVALVASALAADPYCGDVFVFRAKRLDRLRCIYWDGSGMILVTKWLEAGKFVWP
PIRDGAMQMSSQEFSLLLAGIDWTRVKRNAVKRPTKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 4e-17 45
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 1e-12 42
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 4e-12 42
unnamed AAC31493.1 L0014 Not tested LEE Protein 8e-13 42
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 4e-12 42
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 8e-13 42
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-12 42
unnamed AAL99258.1 unknown Not tested LEE Protein 8e-13 42
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 1e-12 42
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 1e-12 42
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 8e-13 42
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-13 41
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 7e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_5101 YP_004557625.1 IS66 Orf2 family protein VFG1709 Protein 3e-13 42
Sinme_5101 YP_004557625.1 IS66 Orf2 family protein VFG0792 Protein 3e-13 42
Sinme_5101 YP_004557625.1 IS66 Orf2 family protein VFG1698 Protein 2e-13 41