Name : Sinme_4842 (Sinme_4842) Accession : YP_004557382.1 Strain : Genome accession: NC_015596 Putative virulence/resistance : Unknown Product : nickel-transporting ATPase Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1216815 - 1218416 bp Length : 1602 bp Strand : - Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: smd:Smed_4688 ABC transporter related; SMART: ATPase, AAA+ type, core DNA sequence : ATGACAGAGATGAAGGACTCCATTCTCGCTGTACGTGGCCTGAAGGTCGACTTTTCCACCCCCGACGGCACCGTCGAAGC GGTCAAGGGCATCGATCTCGACGTCCGTTCCGGCGAGACGCTCGCGGTCGTCGGCGAATCCGGCTCGGGCAAGAGCCAGA CCATGATGGGAATCATGGGCCTGCTCGCCAAGAACGGGACGGTGACCGGTTCGGCGCGCTATCGCGGCCAGGAACTCGTA GGGCTCGCACCGAAGGCCCTGAACAAGGTGCGCGGCTCGAAGATCACCATGATCTTCCAGGAGCCGATGACCTCGCTCGA TCCGCTCTACACCATCGGCCGTCAGATCGCCGAGCCGATCGTCCATCACCGCGGCGGCAGCTTCAAGGAGGCGCGCAGGC GCGTCCTCGAGCTCCTGGAGCTCGTCGGCATTCCCGAGCCGGGGCGGCGCATCGACAGCTATCCGCACGAGCTTTCCGGC GGCCAGCGCCAGCGTGTCATGATCGCCATGGCGCTTGCCAACGAGCCGGATATCCTGATCGCCGACGAGCCGACGACCGC CCTTGACGTGACCATCCAGGCCCAGATCCTCGATCTGCTCAAATCGCTGCAAAGGCGCTTCGGCATGGCGATCGTGCTGA TCACCCACGACCTCGGCATCGTCAAGTACTTCGCCGACCGTGTCGCGGTCATGCGCCGGGGCGAGGTCGTGGAGCAGGGG ATGACGGCTGATATCTTCGAGCGGCCGAAGGGGGACTATACCAGGATGCTGCTGGAGGCCGAACCGAGCGGGCGCAAGGC TTCGCCCCCCGACAACGCCCCGATCATCCTGGAGGGTCGCAATGTCGCGGTGGACTATACGATCCCAGGCGGCCTCTTCC GCGGGGCCTCGGCCGCTTTCCGTGCCGTCGACGGCGTCAATCTTAGGCTCAGGCAGGGTCAGACGATCGGCATCGTCGGC GAATCCGGCTCCGGGAAATCGACGCTCGGCAGGGCGCTGCTGAGGCTTCTGCCGAGCAGCGGTTACTACCGTTTCGGCTC GACCGACATTTCCGGCTTTGACCGCGGCGCGATGCGGCCGCTGCGCCGCCAGCTGCAGCTCGTCTTTCAGGACCCCTACG GGTCGCTCTCGCCGCGCCGGACCGTGGGGGAGATCATCACCGAAGGCCTCCATGTGCATGAGCCCGACCTGAGCCGTGCC GATCGCGACCGCAGGGCCATCGCCGCGTTGAAGGAAGTCGGCCTCGATCCCGCGTCGCGCAACCGCTATCCGCATGAATT CTCCGGCGGACAGCGCCAGCGCATCGCAATCGCCCGCGCGATCATCCTGAAGCCGAAGGTCGTCATTCTCGACGAGCCGA CTTCGGCCCTCGACCGGTCGGTGCAGGGGCAGGTGATCGAACTCCTACGCGATCTGCAGGAAAAGCACGGTCTCTCCTAC ATCTTCATCAGCCACGATCTTTCGGTGGTGAAGGCGATGTCTGACTATGTGATCGTGATGAAGAACGGCCGGATCGTCGA AGAGGGAGAAACGGACGCGATCTTCGATGCGCCGAGGGAGCCCTATACGAAGACGCTGATCGGCGCGGCGTTCAACGTGT GA Protein sequence : MTEMKDSILAVRGLKVDFSTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTVTGSARYRGQELV GLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGSFKEARRRVLELLELVGIPEPGRRIDSYPHELSG GQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQG MTADIFERPKGDYTRMLLEAEPSGRKASPPDNAPIILEGRNVAVDYTIPGGLFRGASAAFRAVDGVNLRLRQGQTIGIVG ESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDRGAMRPLRRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRA DRDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSY IFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLIGAAFNV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-93 | 44 |
oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-72 | 42 |
oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-72 | 42 |
cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-72 | 42 |
oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-72 | 42 |