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Name : Sphch_4161 (Sphch_4161) Accession : YP_004556245.1 Strain : Genome accession: NC_015595 Putative virulence/resistance : Virulence Product : type IV secretion/conjugal transfer ATPase Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 88062 - 90473 bp Length : 2412 bp Strand : - Note : KEGG: sjp:SJA_C1-04650 type IV secretory pathway VirB4 component; TIGRFAM: CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region DNA sequence : GTGGCTAGCGCGGCTGCCCAGCTTCCGCCGCGCAAGACGCCGTGGCGCATATTGCGGCAAGAGGCCGAGCCGGGTCGCTA TCTGCCCTACGTGCGCCACGTGACATCGGAGGTGATCGCGCTCGATAGCGGCGACCTCATGATGATGTTCCGCCTTGAAG GGCTTGCGTTCGAGACCGCGGATCCGATCCACCTCAATGACTGGCACGAGAAGCTCAACGGCACCTGGCGCAACATTGCC GACGATCGGCTCGCGCTCTGGACGCACATCGTTCGCCGCCCGGTCGATGACTATCCCGAAGGCCAATTCCGCTCGGACTT CGCGGCCGATCTGGACGAAAAATATCGCGCGCGGGTGACTGCCAAGCGCATGTTCGTCAACGAGCATTATCTGACGCTGA TCATGCGGCCGGCGGTCGGCTCGGCCGATCGGACCGGGCTTCTCCTCAAGCGCATCGCCAAGGCCAGGGCGGCCGATGAG GAAGTCGACCCCGACGAGTTGGCCCGCTTCGAGGAGAAGGCGCGCGATATCGAAAAGCTGCTTCGGCGGTGCAGCCCCGC GCGGCTCGCTCTTTATGAGCAGAATGGCCTCCTATTCTCCAGGCCGCTCGAAGTGCTCGAGCAAGTCATGATGGGCGCAA AGGCCAAGGTCCCGCTGGTCCGAGGCCATCTTGGATCAGCCCTCTACGGCGAGCGGGTGATCATCGGACGCGAGACGGTC GAGATCCGCGCCCATGATGCGAGCCGCTGGTTGGGCATTTTCGGCATCCGGGAATATCCTGCGCTCACCCGTCCCGGTCA GATGAACGCTCTGCTCGGCCAGGATTTCGCGTTCGTCGTGTCGCAATCCTTCACCTTCATGGGGAAGGCGCGCGCGGCCG AAAGGCTGCGCCGGCGACAGAACCAGATGGCCTCGACCGAGGACGCGGCAGCAAGCCAGGCGCTCGACCTTGAAGACGCC GCCGACGATCTTCAAAGCAATCGGTTCGTGCTGGGCGAACATCACTTCTCGCTTGGGGTGTTTGCCGAGAGCCAGAGGCG GCTCGCCGATAATCTGTCGGCCGCGCGGGCGGCGCTCGCGGACGCTGGTCTGGTGTCGGCGAGGGAAGGTCCGGCGCTCG AAGCAGCCTTCTGGGCTCAGCTTCCCGGTAACTTCGCGTGGCGGGCGCGGCCGGCGGCAATCACATCGCGGAATTTCGCC GCATTGGCACCCTTCCATACCTATCCCGCGGGCCGGCCGAGCGGAAATCATTGGGGTCCGGCGATCGCGCTGATGAAGAC GGCCGCGCAATCGCCCTACTATTTCAACTTCCATGTCGGGGATCTCGGCCACACGCTCATTATCGGTCCCTCGGGCGCGG GCAAAACGGTCGTTCAGAACTTCCTGATGGCGCAGCTCGAGAAGACGGGCGCGCAGCAGATCTTCATCGACAAGGATCGC GGCGCCGAGATCTACGTGCGGTCTGTTGGCGGGATCTATCTGACGCTGAAGAACGGGGAGCCAACCGGCTTCGCGCCGCT GCGGGCGCTCGAATATGGACCGCGCAACCTCGTCTTTCTCGGTCGTCTGATCCGGCAGCTGGTGACGCCGCCGGGCGGCC CGCTGGGCGTCACCCAGGAGCGCATGATCGACGAAGGCTTGGCGTCGCTCGGGCGGCTCGCACCGGAGAACCGATCCATT CTGGCCCTGCGCCAGCTGCTCGGCCAGCGCGACCCGGAAGGCATCGGCGCTCGACTTGAGAAATGGTCGCGGGGCGGATC GCTGGGTTGGGTGTTCGACAACGAGATCGATGCTTTGTCGCTCGATGCGCCGTTCCTCGGCTTCGACATGACCGACTTCC TCGACAATCCGGAAGTTCGCACGCCGATCATGATGTACATGTTCCATCGCATCGACGGCCTTCTGGATGGCCGCCGACTG GTGATCGACATCGATGAGTTCTGGAAGGCGCTGGGTGATGACGCTTTCCGCGCCTTTGCCCAGGATGGCCTGAAGACCTA CCGCAAGCAGAACGCCTTCTTGGTTTTCGGCACGCAGAGCCCGGCCGATGCGCTGCGCTCGGATATCTCACACAGTATCA TGGAGCAGGTCGCGACCAAGATCCTGCTGCCCAACCCCTATGGGCGTGAAACGGATTATATCGACGGGCTGGGCCTGACC CAGGCGGAATTCAAGCTCATCCGTCACGACCTGAACCCCGAATCTCGCCGCTTCCTCATCAAGCAGGGTCATGACTCGAT CGTGGTGGAACTGGACCTGGGCGGCCTCACCGACGAGCTCGCGGTGCTCTCGGGCACCACGGAAACCGTGACGCTCCTCG ATGCCATTCGCGCTGATGTCGGCGACGACCCGGCGAAATGGCTGCCTCTTTTTCACCAGCAGCGTCGGTCTGCATCGGCC AGGAAAGGATGA Protein sequence : MASAAAQLPPRKTPWRILRQEAEPGRYLPYVRHVTSEVIALDSGDLMMMFRLEGLAFETADPIHLNDWHEKLNGTWRNIA DDRLALWTHIVRRPVDDYPEGQFRSDFAADLDEKYRARVTAKRMFVNEHYLTLIMRPAVGSADRTGLLLKRIAKARAADE EVDPDELARFEEKARDIEKLLRRCSPARLALYEQNGLLFSRPLEVLEQVMMGAKAKVPLVRGHLGSALYGERVIIGRETV EIRAHDASRWLGIFGIREYPALTRPGQMNALLGQDFAFVVSQSFTFMGKARAAERLRRRQNQMASTEDAAASQALDLEDA ADDLQSNRFVLGEHHFSLGVFAESQRRLADNLSAARAALADAGLVSAREGPALEAAFWAQLPGNFAWRARPAAITSRNFA ALAPFHTYPAGRPSGNHWGPAIALMKTAAQSPYYFNFHVGDLGHTLIIGPSGAGKTVVQNFLMAQLEKTGAQQIFIDKDR GAEIYVRSVGGIYLTLKNGEPTGFAPLRALEYGPRNLVFLGRLIRQLVTPPGGPLGVTQERMIDEGLASLGRLAPENRSI LALRQLLGQRDPEGIGARLEKWSRGGSLGWVFDNEIDALSLDAPFLGFDMTDFLDNPEVRTPIMMYMFHRIDGLLDGRRL VIDIDEFWKALGDDAFRAFAQDGLKTYRKQNAFLVFGTQSPADALRSDISHSIMEQVATKILLPNPYGRETDYIDGLGLT QAEFKLIRHDLNPESRRFLIKQGHDSIVVELDLGGLTDELAVLSGTTETVTLLDAIRADVGDDPAKWLPLFHQQRRSASA RKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB4 | YP_001610000.1 | VirB4 protein | Virulence | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sphch_4161 | YP_004556245.1 | type IV secretion/conjugal transfer ATPase | VFG2233 | Protein | 3e-178 | 51 |
