Gene Information

Name : Sphch_4158 (Sphch_4158)
Accession : YP_004556242.1
Strain :
Genome accession: NC_015595
Putative virulence/resistance : Virulence
Product : VirB8 family protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3736
EC number : -
Position : 85135 - 85833 bp
Length : 699 bp
Strand : -
Note : PFAM: VirB8; KEGG: sjp:SJA_C1-04610 type IV secretory pathway VirB8 component

DNA sequence :
ATGCGAGCTGCTGATGACCGCTCGGAGGCGGTGCCGGCGTCGGGGCTGCAGCGCTATTTCCGGGACGCACGAAGCTGGGA
TCAGGACAGGATCCGGAACGCGCTGCGCTCGACCCGCATCGCTTGGAGCATCGCGGCCATCGCCTCACTCCTGGCCGCAG
CATCGATCTTTGCAGTTGCGGCTCTGACGCCTCTCAAGACTGTCGTCCCCTATGTTATTCGCGTCAACCAGACCACCGGC
GCAGTAGATGTCCAGACCGCGCTCACCCAGCGGCCGATGCGCTACGATGAGGCGGTCACCAAATACTTCCTCGCCCAGTA
TGTGAGAACCCGCGAAAGCTGGATCCCGGCAGCGGCCGAAGAAAATTTTCGGTTCGTGACGATCCTCTCGCAACCGACTG
AACAGCAGCGCTGGGCGCGTTTCTATAGCAGCAACAATGGTGCAAGTCCCCAAAATGTCTGGGGCAAGAATGCGGTCGTG
CAAGCGCGCGTGCGCAACATCGCCTTCATCAATGATCGCGTCGCCAATGTGCGGTTCACGCGGACGGTCCAGACCGAGAC
CGACGTTCAGAACAGCGATTGGATCGCCACAATCACGTTCGCCTACGCCAACGCGCCCATGGCGGAAGGCGATCGCTACC
GGAACCCGCTGGGATTCCAGGTCGAAAACTATCGTGCCGATCCGGAGGTGATCCGATGA

Protein sequence :
MRAADDRSEAVPASGLQRYFRDARSWDQDRIRNALRSTRIAWSIAAIASLLAAASIFAVAALTPLKTVVPYVIRVNQTTG
AVDVQTALTQRPMRYDEAVTKYFLAQYVRTRESWIPAAAEENFRFVTILSQPTEQQRWARFYSSNNGASPQNVWGKNAVV
QARVRNIAFINDRVANVRFTRTVQTETDVQNSDWIATITFAYANAPMAEGDRYRNPLGFQVENYRADPEVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB8 YP_001610348.1 VblB8 protein Virulence Not named Protein 3e-37 46
virB8 YP_001610004.1 VirB8 protein Virulence Not named Protein 3e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_4158 YP_004556242.1 VirB8 family protein VFG2237 Protein 9e-37 44