Gene Information

Name : Sphch_4155 (Sphch_4155)
Accession : YP_004556239.1
Strain :
Genome accession: NC_015595
Putative virulence/resistance : Virulence
Product : P-type DNA transfer ATPase VirB11
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 82043 - 83047 bp
Length : 1005 bp
Strand : -
Note : TIGRFAM: ATPase, P-type DNA transfer, VirB11; PFAM: Type II secretion system protein E; KEGG: sjp:SJA_C1-04580 type IV secretory pathway VirB11 component; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGCGCGACACCGCCGTCCTTCGTCACTACCTCGAACCGCTTCTTCCGTTGCTGGAGCCAGATGATGTGACCGAGCTCGT
CATCAACCGTCCGGGCGAGGCGGGAATCGAGGACCGGCAGGGGTGGCGATGGCATGAGCTGTCCGAACTCGACAGCGAGT
GGCTTGGAACGCTCGCCGTCGCCGCGGCAAGCTTCACGCACCAGGACATCGATGGGCAGACCCCGATCTGTTCGACCGTC
CTCCCAGGCGGCGAGCGCTGCCAGATCGTAATCCCGTCGGTGACGCCGAGCGGCTGCCCGTCCTTTACGATACGCAAGCC
CTCGACCGTAACCCTGCCGATCGACCAGCTCGCACGCGCTGGCCTCTTTGACACGACGCGCGCGAGCGCCCGGGGCCTTA
CCGAAACCGACGCCGAGTTGGTGGCACTTCGCGATGCGGGCGACTGGCCGGCCTTCTTCAAGGTCGCGGTCGCCGCGCGC
AAGAATATCCTGGTCAGCGGTGCAACCGGGTCCGGCAAGACGACCTTGGCGAAAGCGCTCATCCAGCTCATCCCGCCCGA
CGAGCGACTGCTTACGATCGAGGACACACGCGAACTCATCGTGCCCCATCGCAATGTCGTTCATATGGTCTATTCGAGCG
AGGGGCAGGGCCTTGCAAAGGTCGGTCCCAAGCAACTTCTCGAGAGCGCGCTGCGCATGCGCCCGGATCGGATCCTGCTG
CAGGAGCTGCGCGACGGCACCGCGTTCTTCTACCTGCGCAATGTCAATTCGGGGCACCCTGGGTCGATCACCACGGTGCA
TGCCGGCTCTGCGGCGGGTGCCTTCGAGCAGCTGACGCTACTGGTCAAGGAATCCGAGGGCGGCCGAGATCTCGCGCGCG
ATGATATCCGCGGACTTTTGCGAATGCTCATCGATGTGGTCGTCCAGACCCGGCGCCATGGCGGCCGCTTCGAGGTCGAA
GAGGTCTACTTCCACCCGAAGGTGGGCGATGCCGGTGCAGCGTAG

Protein sequence :
MRDTAVLRHYLEPLLPLLEPDDVTELVINRPGEAGIEDRQGWRWHELSELDSEWLGTLAVAAASFTHQDIDGQTPICSTV
LPGGERCQIVIPSVTPSGCPSFTIRKPSTVTLPIDQLARAGLFDTTRASARGLTETDAELVALRDAGDWPAFFKVAVAAR
KNILVSGATGSGKTTLAKALIQLIPPDERLLTIEDTRELIVPHRNVVHMVYSSEGQGLAKVGPKQLLESALRMRPDRILL
QELRDGTAFFYLRNVNSGHPGSITTVHAGSAAGAFEQLTLLVKESEGGRDLARDDIRGLLRMLIDVVVQTRRHGGRFEVE
EVYFHPKVGDAGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 3e-75 54
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 6e-77 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_4155 YP_004556239.1 P-type DNA transfer ATPase VirB11 VFG2240 Protein 1e-75 54
Sphch_4155 YP_004556239.1 P-type DNA transfer ATPase VirB11 VFG2218 Protein 6e-50 46
Sphch_4155 YP_004556239.1 P-type DNA transfer ATPase VirB11 VFG0024 Protein 1e-45 43