Gene Information

Name : Sphch_3106 (Sphch_3106)
Accession : YP_004555228.1
Strain :
Genome accession: NC_015594
Putative virulence/resistance : Resistance
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 224207 - 224749 bp
Length : 543 bp
Strand : -
Note : PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region; KEGG: cak:Caul_1326 resolvase domain-containing protein

DNA sequence :
ATGCTAGTAGGGTACGCGCGTGTAAGTTCGGTAGGTCAGTCGCTGGATATCCAGTTGGATGCCTTGAAGGACGCGGGGTG
CGAAAAGGTCTTTAGCGAGAAGAAGACCGGAACGGCGGCGGACGGAAGGCAGGCACTTCAAGATGCATTGGACTTTTGCC
GTGAAGGAGACACCCTCCTAGTCACCCGCCTTGATCGTCTGGCAAGGTCATCTGTCGATCTGCATAACATTGTGGCTAAG
CTGGAAACCAAAGGCGTTCGCTTCCGCTGCCTTCAACAGAGTGGGGTCGATACCGATACAGGCATGGGTAAGCTGGTGCT
GGCGATCTTGGGCGCGGTCGCCGCCTTTGAAACCGACATACGTAAAGAGCGGCAGAGAGAGGGCATCGACAAGGCTAAGG
CTAACGGGGTGTACAAAGGTCGTAAGCCTTCGGTTGATGTAGAAGAAGTCCGCAAGCTTAAGTCCGAAGGTATGCGACCG
ACTGATATTGCTAAGATTCTCAATATAGGTCGTGCAAGCGTGTACCGTGCCCTAGAAATATAG

Protein sequence :
MLVGYARVSSVGQSLDIQLDALKDAGCEKVFSEKKTGTAADGRQALQDALDFCREGDTLLVTRLDRLARSSVDLHNIVAK
LETKGVRFRCLQQSGVDTDTGMGKLVLAILGAVAAFETDIRKERQREGIDKAKANGVYKGRKPSVDVEEVRKLKSEGMRP
TDIAKILNIGRASVYRALEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 3e-24 43
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 3e-24 43
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 3e-24 43
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 4e-24 43
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 3e-24 43
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 4e-24 43
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 3e-24 41
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 3e-24 41
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 3e-24 41
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 9e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_3106 YP_004555228.1 resolvase domain-containing protein GU371926.1.gene95.p0 Protein 9e-24 41