Gene Information

Name : Sphch_3080 (Sphch_3080)
Accession : YP_004555204.1
Strain :
Genome accession: NC_015594
Putative virulence/resistance : Unknown
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 191608 - 193044 bp
Length : 1437 bp
Strand : -
Note : KEGG: sal:Sala_2116 succinate-semialdehyde dehydrogenase (NAD(P)+); PFAM: Aldehyde dehydrogenase

DNA sequence :
ATGACCCACAGCTACGACATGCCGCTTGGCCTCTATATCGGCGGCGAATGGATCGGCGCGCAAGGGCGGGATACGCAGCC
GGTGCTGAACCCCGCTACCGGCGCGGTGCTGGGCGAACTGCCGCTGGCGAGCGAGGCGGACCTTGACCGGGCGCTGGAGG
CGGCGGATCGCGGCTTCCGCGCCTGGCGGACCAGCAGCCCGCAGCATCGGGCCGAGGTGCTTGGCCGCACCGCCGCGCTG
ATCCGCGAGCGCGCCGACCATCTGGCCGCGCTCGCCACCTTCGAACAGGGCAAGCCGCTGGCGGAGGCGAAGGGAGAGGC
GTTGGCGACCGCGATGGTGCTGGATTTCCACGCGGGCGAGGCGTCGCGCATCTTCGGCCGGGTGCTGCCCCGGCCCACCG
GCACGCGGTCGATGGTGCTGCAACAGCCGGTCGGCCCGGTCGCGGCCTTCTGCGCGTGGAATTTCCCGATCATGAACCCG
GTGCGCAAGATTTCCCCGGCGATCACGGCGGGATGTTCGGTGATCCTGAAACCCAGCGAGGAAACCCCCGCCACCGCCAT
CGCGGTGATGCGCTGCTTCATCGACGCGGGCCTGCCCGGCGACGTCGCGCAACTGGTGTTCGGCGTGCCGGATCTGGTGT
CCCGCCACCTGCTGGCCTCGCCCGTGACGCGCAAGCTCAGCTTCACCGGCTCCGTGCCGGTGGGCAAGCATCTGATGCGG
CTGGCGGCGGACACGGTGATGCGCACGACGATGGAACTGGGCGGGCACGGGCCGGTGCTGGTGTTCGACGATTGCGATGT
GGATCGGACCATCGACGCGCTGGTGATGCACAAGTTCCGCAACGCAGGGCAGGTGTGCGTCGCGCCAACCCGCTTCCACG
TGCAGCAGGGCGTCTATGAACGCTTTGCCAGGGGTTTTGCCGACCGCGCCGCCGCGCTGCGCATCGGCGACGGCTTTGCC
GCCGACACGCAGATGGGACCGCTCGCCAACCCGCGCCGGCCGGAGGCGATCGGCGCCTTCGTCGAGGATGCGGTGCGCGC
GGGGGCCAGGCTGCTGACCGGCGGCGACGGGCTGGGGGGGGGCGGCTTCTTCTTCCGCCCGACGGTGCTGGCCGACGTGC
CGCTCGACGCGAAGGTCATGCAGGACGAACCGTTCGGCCCGATCGCGACATTCCGCCCCTTCGCCACGGATGACGAGGCG
ATCGCGGAGGCCAACCGCCTGCCCTACGGCCTTGGCGCCTATTGCTTCACCGAAAGCGGCCGTCGGCAGAACCGACTGGC
CGACGAGGTGGAGGCCGGCGTGATCGGCATCAACACCGTGCGGCTTAGCTGGGGCGATTCACCCTTCGGCGGGATGAAGG
ACAGCGGCTTCGGATCGGAAGATGGGCCCGAAGGGGTCGCCGCGCATCTGGCGACGAAGGCTGTGCACATCATGTAG

Protein sequence :
MTHSYDMPLGLYIGGEWIGAQGRDTQPVLNPATGAVLGELPLASEADLDRALEAADRGFRAWRTSSPQHRAEVLGRTAAL
IRERADHLAALATFEQGKPLAEAKGEALATAMVLDFHAGEASRIFGRVLPRPTGTRSMVLQQPVGPVAAFCAWNFPIMNP
VRKISPAITAGCSVILKPSEETPATAIAVMRCFIDAGLPGDVAQLVFGVPDLVSRHLLASPVTRKLSFTGSVPVGKHLMR
LAADTVMRTTMELGGHGPVLVFDDCDVDRTIDALVMHKFRNAGQVCVAPTRFHVQQGVYERFARGFADRAAALRIGDGFA
ADTQMGPLANPRRPEAIGAFVEDAVRAGARLLTGGDGLGGGGFFFRPTVLADVPLDAKVMQDEPFGPIATFRPFATDDEA
IAEANRLPYGLGAYCFTESGRRQNRLADEVEAGVIGINTVRLSWGDSPFGGMKDSGFGSEDGPEGVAAHLATKAVHIM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 3e-65 41