Gene Information

Name : Sphch_2655 (Sphch_2655)
Accession : YP_004554806.1
Strain :
Genome accession: NC_015593
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2820145 - 2820966 bp
Length : 822 bp
Strand : +
Note : KEGG: sjp:SJA_C1-30730 flagellar biosynthetic protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence : 
GTGCCGGGCGCTGAATTGCACTTTCCCGTCATTCCCGCCTTCGCGGGAATGACGAAGGGGTTGGTGGTAGCACTTCTGCT
CGTGGCGCTGTTCATCGCCATGCCCGCCTTCGCCCAGGCCGCGCCCGCCGCCCCGGTGGACAATGGCGGCGCCCTGACCC
GCGCCATGGGGCAGATCAGCGGCGATGGCCGTTCGCTGTCGCTGTCGCTGCAAATCCTGATCCTCATGAGCCTGTTGACG
GTGCTGCCGTCGCTGATCCTCATGATGACCAGCTTCACCCGCATCATCATCGTCCTGTCGCTGCTGCGCCAGGCGCTGGG
GTTGCAGCAGACGCCGCCCAACCAGGTGCTGGTCGGCCTGTCGCTGTTCCTTTCGCTATTCGTGATGCGGCCCGCCATCG
ATCAGATCAACGCCCAGGCCTTCGACCCCTATGGCAAGGGCCAGATTCCGATCGAGGAAGCGGTCGGCCGATCCGCCAAG
GTGCTGCACGGCTTCATGACCAAGCAGACCCGCGAAACCGACCTCAAGCTGTTCCAGAATCTGGCCGAAGCGCCCGCTTT
CCGCACCCCGGCGGACATTCCTTTCTCCATCCTGCTGCCCGCCTTCGTGACGTCGGAGCTGAAGACCGCGTTCCAGATCG
GTTTCATGATCTTCCTGCCGTTCCTGATCATCGACCTCGTCGTCGCCTCCACATTGATGGCGCTCGGCATGATGATGCTG
TCCCCGACCATCATCTCCATGCCGTTCAAGCTGCTGCTGTTCGTGCTGGTCGACGGCTGGGCGCTGACCATGGGGTCGCT
GGCGGGGTCTTTCGCGACATGA

Protein sequence : 
MPGAELHFPVIPAFAGMTKGLVVALLLVALFIAMPAFAQAAPAAPVDNGGALTRAMGQISGDGRSLSLSLQILILMSLLT
VLPSLILMMTSFTRIIIVLSLLRQALGLQQTPPNQVLVGLSLFLSLFVMRPAIDQINAQAFDPYGKGQIPIEEAVGRSAK
VLHGFMTKQTRETDLKLFQNLAEAPAFRTPADIPFSILLPAFVTSELKTAFQIGFMIFLPFLIIDLVVASTLMALGMMML
SPTIISMPFKLLLFVLVDGWALTMGSLAGSFAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 6e-24 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 6e-24 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 4e-24 43
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 9e-24 42
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 9e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_2655 YP_004554806.1 flagellar biosynthetic protein FliP VFG0519 Protein 2e-24 43
Sphch_2655 YP_004554806.1 flagellar biosynthetic protein FliP VFG0044 Protein 1e-26 42
Sphch_2655 YP_004554806.1 flagellar biosynthetic protein FliP VFG0394 Protein 4e-24 41