Gene Information

Name : Sphch_0270 (Sphch_0270)
Accession : YP_004552476.1
Strain :
Genome accession: NC_015593
Putative virulence/resistance : Unknown
Product : cytidine deaminase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0295
EC number : -
Position : 277824 - 278282 bp
Length : 459 bp
Strand : -
Note : KEGG: sjp:SJA_C1-15770 cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; PFAM: CMP/dCMP deaminase, zinc-binding

DNA sequence :
ATGAGCGGAACGGAAGAATTGATCGATGCGGCGCGTGGGGCGATGGCGAACGCCCATGCGCCCTATAGCCGCTTCGCTGT
CGGGGCGGCGGTGCGGCTGACCGACGGGCGGATCGTCACCGGCTGCAATTTCGAGAATGCGAGCTATGGCCTGTCGCTCT
GCGCCGAGACGGTGGCGCTGGCGACGGTCAACGCGCAGGGACGCTTTTCCGATGTGGAGGCGATTGCGGTCGTCGGCGGC
GCGATACGCCCGGACGGCTCCATCGCGGGAAGCGCCGTCGTCACGCCCTGCGGCCGTTGCCGCCAGATCATGAACGAAGC
CGAGCAGATGGCCGGGCGGACGCTCTCCATCTATTGCGCGGCGCCGGATGGGGGCGCGGTGGTCGAACATAGCGTCGCCG
AACTCTTGCCCCATGCCTTTGGTCCCGCCGATCTGGGCCTCACCCCAAGAAAGAGCTGA

Protein sequence :
MSGTEELIDAARGAMANAHAPYSRFAVGAAVRLTDGRIVTGCNFENASYGLSLCAETVALATVNAQGRFSDVEAIAVVGG
AIRPDGSIAGSAVVTPCGRCRQIMNEAEQMAGRTLSIYCAAPDGGAVVEHSVAELLPHAFGPADLGLTPRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd YP_005163382.1 Cytidine deaminase Not tested Not named Protein 8e-11 41