Gene Information

Name : Sphch_2493 (Sphch_2493)
Accession : YP_004554653.1
Strain :
Genome accession: NC_015593
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2651830 - 2652528 bp
Length : 699 bp
Strand : +
Note : KEGG: sjp:SJA_C1-07170 two-component system response regulator CusR; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence : 
ATGAGCCACAAGATTTTGGTGGTGGAGGATGATGCGGACACCGCCGCCTATGTCGCCAAGGGCATGGGCGAGGCGGGCTT
CACCGTCGACCGGGCGGATAATGGCCGCGACGGCCTGTTCCTGGCGAGCGACGGCAGCTATGGCGTGATCATCCTGGACC
GGATGATGCCCGCCATGGACGGCATGGCGACGCTGAAGGCGCTGCGCGCGGCGGGGATAGAGACGCCGGTCATCATCCTG
TCCGCCCTCGGCACGCCGGAGGACCGGGTGGAGGGGCTGACCAGCGGCGCGGACGATTATCTGGTGAAGCCCTTCGCCTT
CGCCGAACTGCTGGCGCGGGTGCAGTTGCTGCTGCGCCGGGGCGGCAGCGGCAGCGCGGTGGTCACGCATCTGCGCCATG
ACGATCTGGAGATGGACCTGCTGTCCCGCCGGGTGAAGCGGGGGTCGCGCACCGTCGACCTGCAACCCCGCGAGTTCCGC
CTGCTGGAATTCTTCCTGCGCCATCCCGATCAAGTGGTGACGCGCACCATGTTGCTGGAGGGGGTGTGGGACTATCATTT
CGATCCCGGCACCAACGTCATCGACGTCCATGTCAGCCGCCTGCGCCGCAAGCTGGATGAAGGCGGCGAAGCCGGCGGTT
CCAGGCCGCTGCTGCATACGGTGCGCGGCATGGGGTATCGGCTGGGGCCGGAGAGTTAG

Protein sequence : 
MSHKILVVEDDADTAAYVAKGMGEAGFTVDRADNGRDGLFLASDGSYGVIILDRMMPAMDGMATLKALRAAGIETPVIIL
SALGTPEDRVEGLTSGADDYLVKPFAFAELLARVQLLLRRGGSGSAVVTHLRHDDLEMDLLSRRVKRGSRTVDLQPREFR
LLEFFLRHPDQVVTRTMLLEGVWDYHFDPGTNVIDVHVSRLRRKLDEGGEAGGSRPLLHTVRGMGYRLGPES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-43 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-42 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator BAC0111 Protein 6e-52 51
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator BAC0125 Protein 1e-49 50
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator BAC0347 Protein 5e-48 50
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator BAC0638 Protein 9e-44 49
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator BAC0083 Protein 4e-49 48
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator BAC0308 Protein 8e-44 46
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator BAC0197 Protein 4e-42 46
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 1e-18 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-43 46
Sphch_2493 YP_004554653.1 winged helix family two component transcriptional regulator VFG1389 Protein 7e-39 46