|
Name : Sphch_2399 (Sphch_2399) Accession : YP_004554566.1 Strain : Genome accession: NC_015593 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2560383 - 2561288 bp Length : 906 bp Strand : - Note : KEGG: eli:ELI_10770 IS511, transposase OrfB; manually curated; PFAM: Integrase, catalytic core DNA sequence : GTGGTGACGCCCGCTGCGCAGCGTGATGCGGTCGCGCATCTCCAGATGACATTGGGGATGAGCGAGCGACGGGCGTGCCG GGTGATTTCAGCGGATCGCAAGAGCATGCGGTATCGTTCATGTCGGGCGGATGATGGCGACCTGCGGTCGCGTTTGCGCG AGTTGGCGCAACAGCGCCGTCGGTTCGGCTATCGACGCCTGCATATCCTGCTCCGCCGGGACGGCATCATGATCAACCGC AAGAAGACCCAACGGCTCTACCGTGAGGAGGGTCTGACGGTTCGGCGGCGGCGGGGCAGAAGGCGCGCCGTAGGGGCGCG GGCACCGGCTCCGGTGCTGGCGCTTCCCAACCAGCGCTGGAGCCTGGACTTCGTCCACGATCAACTCGCCACCGGTCGCC GGTTCCGCATCCTGAACATCGTCGACGATGTAACGCGTGAGTGCTTGCGGGCGGTGCTCGACACGTCGATCTCGGGCAAG CGGGTGGCGCGCGAACTGGGCGATCTCATCGCCGAACGCGGCGCGCCCAAGATGATCGTCAGCGACAACGGGACCGAACT GACATCGAACGCGGTCCTCGCCTGGTCGGGCGATGTCGGCATCGAGTGGCACTATATTGCGCCAGGCAAGCCGACGCAGA ACGGGTTTGTCGAGAGTTTCAATGGCCGCATGCGCGACGAGCTTCTCAACGAAACGCTGTTCTTCACGGTTCGTCAGGCC CGCTCGATCCTCGCCAACTGGGTCGATGACTATAACACCGAGCGGCCACACTCTTCGCTCGGCTATGCCACTCCGGCCGC GTTCGCCGCCGAACTCGAAAAGCAATGGGCGGGTTTAAACCCGCCCATTGCTTCAACCGCGCTCCTGCGCGACAACACTG GCCGGTCTCTGCTTACCGCTGGATGA Protein sequence : MVTPAAQRDAVAHLQMTLGMSERRACRVISADRKSMRYRSCRADDGDLRSRLRELAQQRRRFGYRRLHILLRRDGIMINR KKTQRLYREEGLTVRRRRGRRRAVGARAPAPVLALPNQRWSLDFVHDQLATGRRFRILNIVDDVTRECLRAVLDTSISGK RVARELGDLIAERGAPKMIVSDNGTELTSNAVLAWSGDVGIEWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFTVRQA RSILANWVDDYNTERPHSSLGYATPAAFAAELEKQWAGLNPPIASTALLRDNTGRSLLTAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 9e-47 | 49 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 9e-41 | 42 |
