Gene Information

Name : Sphch_1940 (Sphch_1940)
Accession : YP_004554123.1
Strain :
Genome accession: NC_015593
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0004
EC number : -
Position : 2062089 - 2063513 bp
Length : 1425 bp
Strand : +
Note : KEGG: sjp:SJA_C1-01900 Amt-family ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter

DNA sequence :
ATGTCCTTTTCCAAGAAGCTTTGCGGCGTGATGGGGGCGGTTGGCCTGTCCCTGCTCGCAGCCGCACCGGCGCTGGCCGC
GCCGATCAAGGCGCCAGACGCCACAGCCATGGCCGCCATGGTCAACAAGGGCGACGTCGCCTGGATGCTGGTTTCGGCCG
CTCTGGTGCTGATGATGTCGGTTCCGGGCCTCGCCCTGTTCTACGGCGGCCTGGTCCGCACCAAGAACATGCTGAGCATC
CTGATGCAGGTGTTCATGATCGTTTCCGTCGCGGGCCTGGTCTGGTGCTGCTGGGGCTATTCCATCGCCTTCACCAGCGG
CGGCGACAACCACTTCTTCGGAGGGCTTTCCAAGGCCTTCCTGATGGGCGTGGACGGCACGACCTATGGCGCGACGTTCA
GCAACAACGTCTATCTGCCCGAATTCGTGTTCGTGGTCTTCCAGATGACCTTCGCCATGATCACCCCGGCGCTGATCGTC
GGCGCCTTCGCGGAGCGCGTGAAATTCTCTTCGTTGATCGTGTTCGTCGTGCTGTGGCTGACCTTCATCTATTTCCCGAT
GGCGCACATGGTCTGGTACTGGGCTGGCCCGGACTTCCTGGCTGACGCTCCGACCGACTACGGCCTGCTGTGGGGCTGGG
GCGCGCTCGACTTCGCGGGCGGCACCGTCGTCCACATCAACGCCGGTATCGCCGGCCTGGTGGGCGCGATCATGGTCGGC
AAGCGCGTCGGCTTCCCCAAGGAACCCATGCCGCCGCACTCGCTGACCATGACCATGATCGGCGCCAGCCTGCTGTGGGT
CGGCTGGTTCGGCTTCAACGCCGGTTCCAACCTGGAAGCCAATGCCGTCACCGGCGTCGCCTTCATCAATACCATGGTCG
CCACCTGCGCGGCGGCGGTGAGCTGGTCGCTGGTCGAACAGGTCCACCATGGCAAGGCTTCGCTACTGGGCGCCGTCACC
GGTGCGGTGGCAGGGCTGGTCGCGATCACCCCGGCCGCGGGCTTCGCGGCTCCGATGACCTCGATCGCGCTCGGCTTCAT
CGTCTCCCCGATCTGCTACATCTTCGTGGCGTTCGTGAAGGGCAAGGTCGGCTATGACGACAGCCTGGACGTGTTCGGCG
TGCACTGCATCGGCGGGATCGTCGGCGCCATCGCGACCGGCATCGTCGCGGCTCCGTCGCTGGGCGGCCAGGGCGTGTTC
GACTACACCGTCTTCCCTGCGGCCTTCCATCCGGAAGCCTATAGCATCCCGGCCCAGGTCTGGATCCAGGTCAAGGCGGT
GGTCTTCACCCTGCTCTTCTCCGGCATCGGCAGCGCGATCCTCTACTTCATCATCGACAAGACGATGGGTCTGCGTCCGA
GCAAGGAAGCCGAAATGGAAGGTCTCGACCTCTCCAGCCATGGCGAGCGCGCTTACAACTACTGA

Protein sequence :
MSFSKKLCGVMGAVGLSLLAAAPALAAPIKAPDATAMAAMVNKGDVAWMLVSAALVLMMSVPGLALFYGGLVRTKNMLSI
LMQVFMIVSVAGLVWCCWGYSIAFTSGGDNHFFGGLSKAFLMGVDGTTYGATFSNNVYLPEFVFVVFQMTFAMITPALIV
GAFAERVKFSSLIVFVVLWLTFIYFPMAHMVWYWAGPDFLADAPTDYGLLWGWGALDFAGGTVVHINAGIAGLVGAIMVG
KRVGFPKEPMPPHSLTMTMIGASLLWVGWFGFNAGSNLEANAVTGVAFINTMVATCAAAVSWSLVEQVHHGKASLLGAVT
GAVAGLVAITPAAGFAAPMTSIALGFIVSPICYIFVAFVKGKVGYDDSLDVFGVHCIGGIVGAIATGIVAAPSLGGQGVF
DYTVFPAAFHPEAYSIPAQVWIQVKAVVFTLLFSGIGSAILYFIIDKTMGLRPSKEAEMEGLDLSSHGERAYNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 3e-69 48
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 3e-69 48