Gene Information

Name : Sphch_1542 (Sphch_1542)
Accession : YP_004553736.1
Strain :
Genome accession: NC_015593
Putative virulence/resistance : Virulence
Product : PhoB winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1661709 - 1662410 bp
Length : 702 bp
Strand : +
Note : TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: sjp:SJA_C1-28910 two-compo

DNA sequence :
ATGGCGCGGGCCAGGATGCTGCTGGTGGAGGATGACGCGGCGCTGGCCGAACTGCTCATCTGGCACTTCAAGCGTGAGGA
TTTCGAGGTCTCCCATACTGTCGACGGCGAGGAAGCGCTGTTGCTGGCGCAGGAAACCGTGCCCGATATCGTGCTGCTCG
ACTGGATGGTGGAAAGCCTGTCGGGGATCGAGGTCTGCCGCCGCCTGCGCCGCTTGAACGGCACGGCGAACGTGCCGATC
ATCATGCTGACCGCGCGCGGCGAGGAAGAGGACCGGGTGCGCGGGCTGGAGACGGGGGCGGACGATTATGTGACCAAGCC
CTTTTCGCCCCGCGAACTGGTGGCGCGGGTAGGTGCGGTGCTGCGGCGGGTGCGTCCGGCGCTGGCGGGGGAAACGCTGA
CCTTCTCGGACGTGGAGATGGACACGGTAGGGCACAAGGTCCGTCGCGGTGGACAGGTGATCCCGCTGGGGCCGACCGAG
TTCCGCCTGCTCAAGCATTTCCTGGAGCATCCGGGCTGGGTCTTCTCCCGCGAACGGCTGCTGGACAGCGTGTGGGGGCA
GGACAGCGATATCGAACTGCGCACGGTGGACGTGCATATCCGCCGCTTGCGCAAGGCGATCAACGGGGATGGGCGTTACC
AGGACATCATCCGGACGGTGCGCTCTGCGGGCTATGCGCTGGATACGGACGGGGTGGGCTGA

Protein sequence :
MARARMLLVEDDAALAELLIWHFKREDFEVSHTVDGEEALLLAQETVPDIVLLDWMVESLSGIEVCRRLRRLNGTANVPI
IMLTARGEEEDRVRGLETGADDYVTKPFSPRELVARVGAVLRRVRPALAGETLTFSDVEMDTVGHKVRRGGQVIPLGPTE
FRLLKHFLEHPGWVFSRERLLDSVWGQDSDIELRTVDVHIRRLRKAINGDGRYQDIIRTVRSAGYALDTDGVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-20 41
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 1e-20 41
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 1e-20 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 1e-20 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 1e-20 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 1e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 1e-33 46
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator NC_010400.5986590.p0 Protein 4e-25 46
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator NC_011595.7057856.p0 Protein 4e-25 46
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator NC_010410.6002989.p0 Protein 4e-25 46
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 9e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator VFG1390 Protein 4e-27 42
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator VFG0596 Protein 2e-20 41
Sphch_1542 YP_004553736.1 PhoB winged helix family two component transcriptional regulator VFG1389 Protein 1e-22 41