Gene Information

Name : Sphch_1025 (Sphch_1025)
Accession : YP_004553222.1
Strain :
Genome accession: NC_015593
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.4
Position : 1113465 - 1115495 bp
Length : 2031 bp
Strand : +
Note : PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: swi:Swit_1467

DNA sequence :
ATGGTTCGCGCAACCAGCAAATCCATGTTCACGGCGGAGCTGATCGTGCCTGCGGTCCGCGACGCATTCTTCAAGCTGCA
TCCCGCGCAGCTGATCCGCAACCCGGTGATGTTCGTGACGGCGATCGTCGCCCTGCTGCTGACGATCCTGCTCGTCATCG
GCACCGACGCGCTGGCAACGGGCTTCAAACTGCAATTGGTCGTTTGGCTATGGCTGACCGTTCTGTTCGGGACCTTTGCC
GAAGCGTTGGCGGAGGGGCGCGGCAAGGCCCAGGCTGCCTCGCTCCGCGCTACGAAGGCGGAACTGACGGCAAGGCGGCT
GAAGAGCGGTCGCATCGAGGATCTGCCCGCCAGCCAGTTGCGCGCGGGCGACATCGTACTCGTCACCACTGGCGACCTGA
TCCCTGCCGATGGCGAGGTGATCGAAGGCGTCGCGTCAGTCAACGAATCCGCTATCACCGGCGAATCCGCGCCGGTGATC
CGCGAAGCGGGCGGCGACCGGTCGGCCGTGACAGCGGGCACCCGCGTCATTTCCGACGAGATCAGGGTGAGGGTCACGGT
CGATCCGGGCCAAGGCTTTCTCGACCGTATGATCGCGCTGGTGGAGGGCGCCGAGCGGCAAAAGACGCCCAATGAGATCG
CGCTCACCATATTGCTGGTCGGCCTCACCATCATCTTCTTGATCGCGGTCAGCACGATACCGGGCTTTGCCAGCTATGCG
GGCGGCGCAATCCCCGTCGCGATCCTTGCCGCGCTGCTCATCACCCTCATCCCGACGACCATCGCCGCCCTTCTGTCCGC
CATCGGCATTGCGGGCATGGACAGGCTGGTGCGCTTCAATGTGCTTGCCAAGTCGGGCCGGGCGGTCGAGGCGGCGGGCG
ATATCGACGTGCTGCTGCTCGACAAGACCGGCACCATCACCATCGGCGACCGGCAGGCGTCCGAGTTCCGGACTGTGGAC
GGCACGCAGCCCGGCCAGCTCGCTGAGGCCGCGTTGCTCGCCAGCCTGGCCGACGAGACGCCAGAAGGCCGCTCCATCGT
GGTGCTGGCGCGGGAGAAATTCGGCGTAAGGAGGGCGGTCCTGCCCGCCGATGCAACGGTCATTCCCTTCACCGCTCAAA
CCCGTATATCGGGCGTAAAAACCGGCGGAGCGCTGATCCAGAAGGGCGCGGTGGACTCGATCCTGAAGGCCAATCCGGGC
CTCGACGAAACCGCCGCCGCGACCGAGCTGCGCCGCATCACCGACGAGATCGCCCGCGCGGGCATGACCCCGCTGGCGGT
CGCACAGGACGGCAGGTTGCTGGGCGCGATCGCGCTCAAGGACATCATCAAGGCGGGTATAAGGGAACGCTTCGCGGAGC
TGCGCCGGATGGGCATTCGCACGGTGATGATCACCGGCGACAATCCTTTGACCGCCGCCGCAATAGCCGCGGAGGCAGGT
GTGGATGACTTTCTCGCGCAGGCAACGCCGGAAGACAAGCTGGACCTTATCCGTCGGGAACAGCAAGGCGGCAAGCTGGT
CGCCATGTGCGGCGACGGCACCAACGATGCGCCCGCGCTCGCGCAGGCCGACGTCGGCGTTGCGATGAACACCGGGACGC
AGGCGGCACGCGAGGCGGGCAATATGGTCGATCTCGACAGCGACCCGACCAAGCTGATCGAGGTGGTGGGCCTCGGCAAG
CAGATGCTGATGACGCGCGGTGCGCTCACCACCTTCTCGGTCGCCAATGACGTCGCCAAATATTTCGCGATTATCCCGGC
CATGTTTGTGACGCTCTATCCGGGGCTTGGCGTCCTCAATGTCATGGGCCTGGCCACGCCGGAAAGCGCGATCCTCTCCG
CCATCATCTTCAACGCGCTCATCATTCCGCTCCTGGTTCCGCTGGCGCTGAGGGGCGTGACCTACAAACCGATGGGAGCA
GGTCCGTTGCTGGCGCGCAATCTCGCCATCTACGGCCTTGGCGGTCTGGTCGCGCCGTTCGTCGGCATCAAGATCATCGA
CATGATAGTCGGCGGCCTCGGTCTCGCATAA

Protein sequence :
MVRATSKSMFTAELIVPAVRDAFFKLHPAQLIRNPVMFVTAIVALLLTILLVIGTDALATGFKLQLVVWLWLTVLFGTFA
EALAEGRGKAQAASLRATKAELTARRLKSGRIEDLPASQLRAGDIVLVTTGDLIPADGEVIEGVASVNESAITGESAPVI
REAGGDRSAVTAGTRVISDEIRVRVTVDPGQGFLDRMIALVEGAERQKTPNEIALTILLVGLTIIFLIAVSTIPGFASYA
GGAIPVAILAALLITLIPTTIAALLSAIGIAGMDRLVRFNVLAKSGRAVEAAGDIDVLLLDKTGTITIGDRQASEFRTVD
GTQPGQLAEAALLASLADETPEGRSIVVLAREKFGVRRAVLPADATVIPFTAQTRISGVKTGGALIQKGAVDSILKANPG
LDETAAATELRRITDEIARAGMTPLAVAQDGRLLGAIALKDIIKAGIRERFAELRRMGIRTVMITGDNPLTAAAIAAEAG
VDDFLAQATPEDKLDLIRREQQGGKLVAMCGDGTNDAPALAQADVGVAMNTGTQAAREAGNMVDLDSDPTKLIEVVGLGK
QMLMTRGALTTFSVANDVAKYFAIIPAMFVTLYPGLGVLNVMGLATPESAILSAIIFNALIIPLLVPLALRGVTYKPMGA
GPLLARNLAIYGLGGLVAPFVGIKIIDMIVGGLGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-143 59
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-143 59
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 5e-127 54
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 7e-127 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 7e-127 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 7e-127 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 7e-127 54
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-128 54