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Name : Sinme_5905 (Sinme_5905) Accession : YP_004551545.1 Strain : Genome accession: NC_015591 Putative virulence/resistance : Virulence Product : type IV secretion/conjugal transfer ATPase VirB4 family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 607564 - 609960 bp Length : 2397 bp Strand : - Note : TIGRFAM: CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain; KEGG: xau:Xaut_5086 type IV secretion/conjugal transfer ATPase; SMART: ATPase, AAA+ type, core DNA sequence : ATGAAAGGGACCTCGGATTTGCCTAGCCTGACCACACTCAAATCTCGCGAACTCGGTCCGGAGACCTTCATCCCCTATGT CCGCCATGTCGACGAGTCGACAATCGCGCTCGATTCCCGGGCGCTGATGGTGATGATCGCGCTCGAAGGCGTCTCCTTCG AGACCGCCGATATTCTCGACCTGAATGCCCTCCATCGCGACCTCAACACCCTCTACCGCAACATCGCCGACGAGCGGCTT GCCTTGTGGACGCATCTCATCCGCCGTCGCGACAACAGCTATCCAGAAGGCACGTTCGCCACACCGTTCTCGGCGGCGCT CAACGATAAGTACCGCGAAAGAATGGTAGGCGAGGACCTGTTTCGCAACGACCTCTATCTGTCGATTCTCTGGTCACCAG CTCGCGATCCGGCAGACAAGGCGGCAAAACTGCTGTCGCGCCTGCGTCGGGCCCGCCGTGTCGGGACCGAACTCGATGAG GACGCCCTCAAGCATCTCCGCGACAAGGTCATCGACATCACCGCCGCTTTGAGACGCTTCGAGCCGCGCGTGTTGACCCT CTACGAGCACGACGGCCTCATGTTCTCGGAACCGAGCGAGGTGCTCCATCAGCTCGTCGGCGGCCGTCGCGAGCCGATCC CGCTGACAGAGGGGCGCATCGCTTCTGCCATCTACTCGGATCGCGTCATCGTAGGGCGCGAGACGATTGAGATCCGGCAC GAGGCGGACAGCCGTTATGCCGGCATGCTGAGCTTCAACGAGTATCCGGCCCGCACCAGGACCGGCATGCTTGACGCCGT GCTCACCAGCCCGTTTGAACTCATTCTGGCGCAATCCTTCTCATTCGTCTCGAAGGCCGACGCGCGCGTGATCATGGGCC GCAAGCAAAACCAGATGGTCAGCAGTGGCGACAAGGCGGCCTCGCAGATCGAGGAGCTTGATGGGGCGATGGACGATCTC GAGTCCAACCGGTTCGTGTTCGGCGAGCACCACCTGACGCTTTCCGTCTTTGCCCCCTCAGTGAAGGAACTGACCGACAA TCTTGCCAAGGCACGCGCCAGCATGACCAGTGGCGGCGCAGTCGTCGCGCGCGAGGATCTCGGCCTTGAGGCGGCCTGGT GGGCGCAGCTACCGGGCAACTTCCGTTATAGGGCCCGGTCCGGCGCGATCACGTCGCGGAACTTCGCAGCGCTGTCGCCC TTCCACTCTTATCCGCTCGGCCAAAAGGACGGTAACGAGTGGGGACCCGCCGTCGCCCTGCTCAAGACCGCGTCCGGCTC GCCGTACTACTTCAACTTCCATTACGGCGATCTCGGCAACACCTTCGTCTGCGGGCCGTCCGGCGCCGGCAAAACGGTGC TGCTCAACTTCATGCTGTCGCAGCTAGAAAAGCATGATCCGCATGTGGTGTTCTTCGATAAGGACAGGGGAGCCGATCTC TACGTGCGCGCCGCCGGCGGCACCTATCTGCCTCTCAAGAACGGCATCCCGACCGGTTGCACCCCCTTAAAGGCCCTCGA ATTGACGCCGGAGAACAAGGTCTTTCTGACACGCTGGGTCGGCAAGCTGGTCGGCTCGGCGACGCGTGAACTGAGCGTGA CCGAACTCCGCGACATTGCGTCCGCCATCGACGGCCTTGCCGACCTGCCGGTCGAGCGTCGGACGATCGGCGCGCTCAGG ACCTTTCTCGACAACACGAACCCGGAAGGGATCGCAGCCAGGCTGCGGCGGTGGGAGAAGGGAGGGCCGCTCGGCTGGGT CTTCGACAACGTCATCGAGGATATCGGTTTCGGAGAGTTCGGCGGTGGCAAGTTCGTTGGCTACGACATGACCGACTTTC TCGACAACGAGGAAATCCGGACCCCGCTGATGGCCTATCTCTTCCATCGCGTCGAGCAACTAATCGACGGCCGCAGGATC ATCATCGTCATCGACGAGTTCTGGAAAGCCCTCCAGGACGAAGGGTTCCGCGATCTCGCGCAGAACAAGCTTAAGACGAT CCGCAAGCAGAACGGCCTCATGCTGTTTGCGACCCAGAGCCCGCGCGACGCGATCGTCTCGCCGATCGCTCACACCATCA TCGAGCAATGCCCGACACAGATTTTTCTGCCGAACTCCCGCGGCAATCATGCCGACTATGTCGATGGCTTCAAGCTGACG GAGCGCGAATTCGAGCTGGTCGCGCGTGAGCTCTCCATCGAGAGCCGGCAGTTCGTGTTGAAGCAGGGACATAACAGCGT CGTCGCCGAGCTGGATCTCAAGGGCCTTGACGACGAACTCGCCATCCTCTCCGGACGAACCGCCAATGTCGAACTTGCCG ATGCGATCCGTGCGGAGGTCGGCAGCAACGCAAAGGATTGGCTTCCCGTTTTCCAGCAAAGAAGGAGTGCGACCTGA Protein sequence : MKGTSDLPSLTTLKSRELGPETFIPYVRHVDESTIALDSRALMVMIALEGVSFETADILDLNALHRDLNTLYRNIADERL ALWTHLIRRRDNSYPEGTFATPFSAALNDKYRERMVGEDLFRNDLYLSILWSPARDPADKAAKLLSRLRRARRVGTELDE DALKHLRDKVIDITAALRRFEPRVLTLYEHDGLMFSEPSEVLHQLVGGRREPIPLTEGRIASAIYSDRVIVGRETIEIRH EADSRYAGMLSFNEYPARTRTGMLDAVLTSPFELILAQSFSFVSKADARVIMGRKQNQMVSSGDKAASQIEELDGAMDDL ESNRFVFGEHHLTLSVFAPSVKELTDNLAKARASMTSGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALSP FHSYPLGQKDGNEWGPAVALLKTASGSPYYFNFHYGDLGNTFVCGPSGAGKTVLLNFMLSQLEKHDPHVVFFDKDRGADL YVRAAGGTYLPLKNGIPTGCTPLKALELTPENKVFLTRWVGKLVGSATRELSVTELRDIASAIDGLADLPVERRTIGALR TFLDNTNPEGIAARLRRWEKGGPLGWVFDNVIEDIGFGEFGGGKFVGYDMTDFLDNEEIRTPLMAYLFHRVEQLIDGRRI IIVIDEFWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNSRGNHADYVDGFKLT EREFELVARELSIESRQFVLKQGHNSVVAELDLKGLDDELAILSGRTANVELADAIRAEVGSNAKDWLPVFQQRRSAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB4 | YP_001610000.1 | VirB4 protein | Virulence | Not named | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sinme_5905 | YP_004551545.1 | type IV secretion/conjugal transfer ATPase VirB4 family | VFG2233 | Protein | 0.0 | 63 |
