Gene Information

Name : Sinme_5897 (Sinme_5897)
Accession : YP_004551537.1
Strain :
Genome accession: NC_015591
Putative virulence/resistance : Virulence
Product : P-type DNA transfer ATPase VirB11
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 601669 - 602658 bp
Length : 990 bp
Strand : -
Note : TIGRFAM: ATPase, P-type DNA transfer, VirB11; PFAM: Type II secretion system protein E; KEGG: ret:RHE_PD00153 transport secretion system IV, VirB11 protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGACCGAAGGTGCCGACGCAACGGTCGTTCGTGAACTGCTCTCTCCGTTCGCGCCGTTCCTCGGTGACAGGTCGCTCTA
CGAAGTGATCGTAAACCGGCCCGGGCAAGTGCTGACGGAAGGCGCTGGTGGTTGGCGGACCTATGACCTGCCGGAGCTTT
CCTTCGAGAAGCTGATGCGCCTTGCCCGGGCAGTTGCCAGTTTTTCCCACCAATCAATTGATGAAACGCGACCGATCCTA
TCGGCAACCCTGCCCGGGGACGAACGCATCCAGATCGTCATCCCGCCAGCCACCACCAGGAACACGGTCAGCATCACCAT
CCGCAAGCCATCGTCGGTCACATTCACCCTCAATGATCTGAAAGAGAGAGAGTTTTTCTCAGAGACGCGATCGGCCAACG
ACGGCGCCTCGACGCGGGACGAGGGCTTGCTGGCGCTTTACCGTGCCGGCCGCTTCAAGGAATTTTTGCGGCAAGCCGTC
ATTTCACGGAAGAACATCATCATCTCAGGCGCAACCGGTTCGGGCAAGACGACTCTCTCGAAAGCGCTGATTAAACACAT
TCCCGAGCATGAGCGGATCATTTCGATCGAGGACACACCCGAACTCATTATTCCGCAGCCCAACCACGTGCGCCTATTCT
ATTCGAACGGTGCCCAGGGACTCTCGGGGGCTGGCCCCAAAGAGCTGCTCGAATCCTGTCTCCGGATGCGGCCGGACCGA
ATTTTGCTGCAGGAACTGCGCGATGGCACGGCATTCTACTACGTTCGCAACGTCAACTCCGGTCACCCCGGATCGATAAC
TACCGTGCATGCCGATTCTGCCAAACTCGCCTTCCAACAGTTAACGCTTCTCGTGAAGGAATCGGCAGGGGGACGGAATC
TGGACCGTGATGACATCGATAAATTATTGAAGGTATCGATCGACGTAATTGTTCAATGCAAGCGAATAGATGGGCGATTT
CGTGCAACAGAAATCTACGTTCGAGCCTAA

Protein sequence :
MTEGADATVVRELLSPFAPFLGDRSLYEVIVNRPGQVLTEGAGGWRTYDLPELSFEKLMRLARAVASFSHQSIDETRPIL
SATLPGDERIQIVIPPATTRNTVSITIRKPSSVTFTLNDLKEREFFSETRSANDGASTRDEGLLALYRAGRFKEFLRQAV
ISRKNIIISGATGSGKTTLSKALIKHIPEHERIISIEDTPELIIPQPNHVRLFYSNGAQGLSGAGPKELLESCLRMRPDR
ILLQELRDGTAFYYVRNVNSGHPGSITTVHADSAKLAFQQLTLLVKESAGGRNLDRDDIDKLLKVSIDVIVQCKRIDGRF
RATEIYVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 6e-91 58
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 7e-94 58
unnamed AAP70289.1 Pilx11/VirB11-like protein Not tested HPI Protein 4e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_5897 YP_004551537.1 P-type DNA transfer ATPase VirB11 VFG2240 Protein 4e-93 61
Sinme_5897 YP_004551537.1 P-type DNA transfer ATPase VirB11 VFG2218 Protein 8e-63 47
Sinme_5897 YP_004551537.1 P-type DNA transfer ATPase VirB11 VFG0024 Protein 1e-52 42