Gene Information

Name : Sinme_5544 (Sinme_5544)
Accession : YP_004551255.1
Strain :
Genome accession: NC_015591
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 268606 - 269298 bp
Length : 693 bp
Strand : +
Note : KEGG: smd:Smed_5362 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduc

DNA sequence : 
ATGACCGCAGAGCGTATCCTCGTCGTGGACGACGAGCCGCAGATCCAGCGCTTCTTGCGCCCGGCGCTCGCAGCCGCCGG
CTACGAGGTGATAGAGGCGGCAAACGGCGCGCAAGCACTCAAGGCGGCTGTGACGGCGGCGCCGGACGTCGTGATCCTGG
ATCTCGGCCTTCCCGACATGGACGGCAAGGATGTGGTGGCCAATATCCGCGCCTGGTCCCAAGTCCCGATCATCATCCTT
TCGGCGCGTGACCGTGAAAGCGAGAAGATCGCTGCCCTCGACCTCGGCGCCGACGACTACATCGAGAAACCCTTCGGGAT
CGGCGAACTGACGGCGCGTATCCGCGCGGCGCTGCGCCATCGCATCCAGATGGCAGGAGGCCAGGCGCAGCTGTCAGCGG
ATGGCCTTTCGATCGATATGGTCAAACGCGTCGTGACGCGCGACGGCGCGGCGCTCCGGCTGACGCCAAAGGAATACGAC
CTTCTCGTTATGCTCGCACATCACGCGGGTCGCGTGGTTACCCACAGGACGCTGCTTACCTCCGTCTGGGGCCTCGCCCA
CGGGGAGGACCTGCATTACCTGAGAGTTTTCATCGGTCAGCTGCGTGGCAAGATCGAACGCGATCCCGGCAATCCGAAGA
TCGTCCGCACCGAACCCGGCGTCGGTTACCGCTTCGTCGGCGACGAGGATTGA

Protein sequence : 
MTAERILVVDDEPQIQRFLRPALAAAGYEVIEAANGAQALKAAVTAAPDVVILDLGLPDMDGKDVVANIRAWSQVPIIIL
SARDRESEKIAALDLGADDYIEKPFGIGELTARIRAALRHRIQMAGGQAQLSADGLSIDMVKRVVTRDGAALRLTPKEYD
LLVMLAHHAGRVVTHRTLLTSVWGLAHGEDLHYLRVFIGQLRGKIERDPGNPKIVRTEPGVGYRFVGDED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-43 44
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-43 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_5544 YP_004551255.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 5e-32 43
Sinme_5544 YP_004551255.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 2e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_5544 YP_004551255.1 winged helix family two component transcriptional regulator VFG1390 Protein 4e-34 41