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Name : Sinme_5541 (Sinme_5541) Accession : YP_004551252.1 Strain : Genome accession: NC_015591 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.4 Position : 263280 - 265322 bp Length : 2043 bp Strand : + Note : TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: smd:Smed_5359 potassium-transporting ATPase subunit B; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase DNA sequence : ATGTCAAACAAACCCAAGACCCCGAACCTCTTCGACCCGAAGATACTCTTCCCGGCAGCGAGAGCCGCTTTCGTCAAGCT TGATCCGCGCCAGCTCGTGCGCAATCCGGTGATCTTCGTCACCGAAGCCGTGGCGGCGTTGGTGACCCTCTTCTTCGTTC TCGATGTGGCAACCGACGGCGGCAGCCTGCTCTTCTCGGGCCAGATCGCCGCCTGGCTATGGTTTACCGTTCTCTTCGCC ACCTTCGCCGAAGCCGTTGCCGAGGGGCGCGGCAAGGCGCAGGCCGACTTCCTCCGCCGTACCAAATCGGAGCTCAGCGC CCGCAAGCTTGTCGCCCCCGAGGGTCGGGAGACCAAGGAAACCCCCGCCACCATGCTGAAGGTCGGGGATCTCGTGCTCT TAGAGGCCGGCGAATTGATCCCGGGCGACGGCGAGGTCGTCGAAGGGATCGCCTCGGTCAACGAGAGCGCGATAACGGGC GAATCGGCCCCGGTGATCCGCGAGGCGGGCGGCGATCGCTCCGCCGTCACCGGCGGTACCGAGGTGCTTTCGGATTGGAT CAAAGTCCGCATCACGACCGCCCCGGGTTCGACCTTCGTCGATCGCATGATCGCGCTCATCGAGGGGGCGCAGCGGCAGA AGACGCCGAACGAGATCGCGCTGTCGATCCTGCTTTCCGGATTGACGCTGATCTTCCTGATTGCCGTGGTGACGCTCTGG GGGCTTGCCGCCTATTCGGCGACCGTGCTTTCGGTGACCGTGCTTTCCGCCCTGCTTGTCACGCTGATCCCGACGACCAT CGGCGGATTGCTTTCGGCGATCGGCATCGCCGGCATGGACCGGCTGGTTCGCTTCAACGTGATCGCCACCTCCGGCCGCG CCGTCGAGGCCGCGGGGGACGTTGACACGCTGCTCCTCGACAAGACCGGGACGATCACCTTCGGCAACCGCATGGCAAGC GATTTCCTGCCCGTGCCGGGCGTAACCGTGGAGGAGCTCGCCGATGCGGCGCTCCTCGCAAGCCTTGCCGACGAGACGCC GGAGGGCCGCTCCATCGTGGCGCTCGCCACCGGCGAGTTCGGGCGCCGGGCGTCCGAGGCCGGGATAGATGCGATCGTGC CCTTTGCCGCTGAAACCCGGTTGTCCGGCGTCGATCACGGCGGCCGTCGGCTGCGCAAGGGCGCGGTCGACTCGGTTCTG AGATTTGCCGGCCTGTCCGACAGCAATACCCCCCAGGAATTCCGGCAGGCGGTCGACCGGGTCGCCCGAACCGGCGGCAC GCCGCTCGCCGTCGCCGACGGCAACCGGCTGCTCGGCGTGATCCACCTGAAGGACATCGTGAAACCCGGAATCAAGGAGC GCTTCTCCGAATTGCGCGCCATGGGGATCCGCACGGTAATGGTGACCGGTGACAACCCGATCACTGCCGCGGCAATCGCC TCGGAGGCCGGCGTCGACGATTTCCTCGCCGAAGCGACGCCGGAAGACAAGCTCGCCTATATCCGCAAGGAACAGAAGGG CGGCCGGCTGATCGCCATGTGCGGCGACGGCACCAACGATGCGCCGGCGCTCGCCCAGGCGGATGTGGGCGTCGCCATGC AGACCGGGACGCAAGCCGCCCGCGAAGCGGCCAACATGGTGGACCTCGACTCGAGCCCGACCAAGCTGATCGAGATCGTC GAGATCGGCAAGCAATTGCTGATGACGCGCGGGTCTCTCACGACCTTCTCGATCGCCAACGACGTGGCGAAATACTTCGC CATCATCCCGGCGCTCTTCGTCACCACCTATCCGGCGCTCGGCGTGCTCAACGTAATGGGGCTGGCGTCACCGCAGTCGG CTATCCTGTCGGCCGTCATCTTCAACGCGCTGATCATCGTGGCGCTCATTCCGCTGGCATTGAAGGGCGTCAGGTACCGT CCCGTCGGCGCGGCAGCCCTGCTTCGCGGCAATCTCCTCGTCTACGGCCTCGGCGGCCTGGTCCTGCCCTTCGCAGGGAT CAAGCTGATCGACCTTGCCGTCTCGAACCTCAACCTGGTGTGA Protein sequence : MSNKPKTPNLFDPKILFPAARAAFVKLDPRQLVRNPVIFVTEAVAALVTLFFVLDVATDGGSLLFSGQIAAWLWFTVLFA TFAEAVAEGRGKAQADFLRRTKSELSARKLVAPEGRETKETPATMLKVGDLVLLEAGELIPGDGEVVEGIASVNESAITG ESAPVIREAGGDRSAVTGGTEVLSDWIKVRITTAPGSTFVDRMIALIEGAQRQKTPNEIALSILLSGLTLIFLIAVVTLW GLAAYSATVLSVTVLSALLVTLIPTTIGGLLSAIGIAGMDRLVRFNVIATSGRAVEAAGDVDTLLLDKTGTITFGNRMAS DFLPVPGVTVEELADAALLASLADETPEGRSIVALATGEFGRRASEAGIDAIVPFAAETRLSGVDHGGRRLRKGAVDSVL RFAGLSDSNTPQEFRQAVDRVARTGGTPLAVADGNRLLGVIHLKDIVKPGIKERFSELRAMGIRTVMVTGDNPITAAAIA SEAGVDDFLAEATPEDKLAYIRKEQKGGRLIAMCGDGTNDAPALAQADVGVAMQTGTQAAREAANMVDLDSSPTKLIEIV EIGKQLLMTRGSLTTFSIANDVAKYFAIIPALFVTTYPALGVLNVMGLASPQSAILSAVIFNALIIVALIPLALKGVRYR PVGAAALLRGNLLVYGLGGLVLPFAGIKLIDLAVSNLNLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-142 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-142 | 60 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-129 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-129 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 9e-131 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-129 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-129 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-129 | 54 |
