Gene Information

Name : Sinme_6565 (Sinme_6565)
Accession : YP_004552105.1
Strain :
Genome accession: NC_015591
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1271823 - 1272194 bp
Length : 372 bp
Strand : -
Note : PFAM: Transposase IS3/IS911family; KEGG: rsl:RPSI07_mp0238 transposase

DNA sequence :
ATGGAAGTTCTCTCCGGGCCGGAACGTCGGCGGCGCTGGAGCACGGCAGAGAAGCTGGCGATCATCCACGAGACCGATGA
GGCGGACGCGACGGTGAGCATCGTCGCGCGTCGGCACGGCATTCAGCCGAACCAGTTGTTCACCTGGCGCAAGCTGGCGT
CCCAAGGGGCATTGACGGCGACGGCCGCCGAAGAGGAGGTTGTTCCGGCATCCGAATACCGGGCGCTTCAGGCGCAGGTG
AAGGAGTTGCAACGACTGTTGGGCAAGAAGACGATGGAGAGCGAAATCCTGAAGGAAGCCCTCGAAATCGCCGGTAGCCC
AAAAAAACATCTGTTGCGCTCGCTCTCTCTTCCGAGGGGGATTTTGGGATGA

Protein sequence :
MEVLSGPERRRRWSTAEKLAIIHETDEADATVSIVARRHGIQPNQLFTWRKLASQGALTATAAEEEVVPASEYRALQAQV
KELQRLLGKKTMESEILKEALEIAGSPKKHLLRSLSLPRGILG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 5e-20 60
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 5e-20 60
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 4e-20 60
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 4e-20 60
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 4e-20 60
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 5e-20 60
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 3e-20 60
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 2e-20 60
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-19 59
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-19 59
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-19 59
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 2e-16 53
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 3e-16 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_6565 YP_004552105.1 transposase IS3/IS911 family protein VFG0648 Protein 1e-20 60
Sinme_6565 YP_004552105.1 transposase IS3/IS911 family protein VFG0622 Protein 3e-20 59
Sinme_6565 YP_004552105.1 transposase IS3/IS911 family protein VFG0609 Protein 3e-20 59
Sinme_6565 YP_004552105.1 transposase IS3/IS911 family protein VFG1733 Protein 9e-17 53