Gene Information

Name : Sinme_6564 (Sinme_6564)
Accession : YP_004552104.1
Strain :
Genome accession: NC_015591
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1271134 - 1271826 bp
Length : 693 bp
Strand : -
Note : PFAM: Integrase, catalytic core; KEGG: bvi:Bcep1808_7043 integrase catalytic subunit

DNA sequence : 
ATGAAGACCGTTTGCGAAACTTTGGGTGTCGCTCGCTCGAATATCGCCGCGCGTGCCGCAGGCTCCCCTTCCAGAGCCAG
AGGACGCCCGCCACTACCTGATCGCGAGCTGGTGGAGGACATCAAGGCCGTCATCGCCGATATGCCCACCTACGGTTATC
GGCGTGTCCATGCCATCCTGCGTCGGAATGCCCGGAAACTGGGGAGTTCGTGGCCCAATGCCAAGCGCGTCTACCGGGTG
ATGAAGCTGCACAATCTGCTGCTGGTGCGCCACACCGGAGCGGCCGATGATCGCCTTCACGACGGTCAGGTCGCTGTTGA
ACGTTCGAACATCAGATGGTGCTCCGACGGCTTCGAGATCGGCTGCGACAACAAGGAGAAGGTCCGGGTCGCCTTCGCTC
TCGACTGCTGCGACCGCGAGGCAATCGCCCATGTCGCCACCACCGAGGGCATCAAGAGCGAAGACGTGCAAGATCTCGTG
ATCACCGCCGTCGAGAACCGCTTCGGCCGCATCAACATGCTGTCCGAGCCCATCGAATGGCTCACCGACAACGGCTCCTG
CTTTGTTGCCAGGGACACCGCATCCTTGCTCCGCGACATCGGCATGGAACCTTGCACGACACCGGTGCGAAGCCCACAGT
CGAAGGAGCAGACATCACGATGCACCTTGTTGGATTTGTTGAGCGTCAATTAA

Protein sequence : 
MKTVCETLGVARSNIAARAAGSPSRARGRPPLPDRELVEDIKAVIADMPTYGYRRVHAILRRNARKLGSSWPNAKRVYRV
MKLHNLLLVRHTGAADDRLHDGQVAVERSNIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSEDVQDLV
ITAVENRFGRINMLSEPIEWLTDNGSCFVARDTASLLRDIGMEPCTTPVRSPQSKEQTSRCTLLDLLSVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 1e-40 54
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 2e-43 53
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-43 53
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-43 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_6564 YP_004552104.1 integrase catalytic subunit VFG0649 Protein 6e-41 54